Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01101 ATGGAGGGTTTTATGAGGCTTTTGGTGTCTGCAAAGCCATATTTAGGGGTCGTTTTTGTGCAGTTCGGGTCGGCTGGAATGGCGATCATTGCGAAGTCAGCTCTCAACAAAGGGATGAGCCAATATGTGTTTGTGTTCTATCGAATGGCTGTTGCTACTCTCGTCTTTGCTCCTTTTGCCATTGTCTTTGACAGGAAAGTGAGGACTAAGATGACCCTTCCGTTGTTCTTCAAGATTGTGATGCTCGGTTTATTAGAGCCCGTGATTGATCTGAACTTGTACTTTACGGGTATGAAGTTCACAACAGCAACCTTTGCAGTCGCCATGTGCAATGTTCTACCAGCATTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGTCAAGCAAAAATCATAGGAACCATGGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAACAGGACCCATGTTGAATCTGCCATGGACAAAGCCCTACCACCCCTCTGCTTCTTCATCTTCTTCTTCAGCTGGTTCTGCAAATCACCAAAGCCCAATCAAGGGCTCCCTTATGATTGCCATTGGCGACATTTCCTGGTCAGCTTTCATCATTCTTCAGATGATTACATTGAAATCGTACCCGGCCGAGCTGTCTCTTACAGCGTTGATTTGCTTGGTGGGTACCATTGGTGGCTGTGGGGTGGCTTTGGTCATGGAGAGGGGGAACCCTTCTGCTTGGGCTGTGCACTTTGATAGACAGCTTCTGGCAGTGGTTTATGCTGGAGTAATGTGTTCAGGGGTAACTTATTATATTCAAGGAGTAGTGATGAAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTGAGCTTGATTCTCGTTGCAATCTTGAGCTCCTTCATCTTGTCCGAGATCATGTTCCTGGGAAGGATTGTTGGAGCAGTGGTGATAATCACAGGGTTGTACCTGGTTTTGTGGGGCAAAAGCAAGGATCAGCTTTTAGTTAAACCAGAATCTGATAAGATAACATCTGGTAAGCAACAAATGATTGCAACAACGGGTGAGGAGGGCTCGAAGTCCGTTCAATCGAGTCAAGAATTCACGGCGCTTGATGTTGGCAAAGAGGACACAAAATGA 1149 45.69 MEGFMRLLVSAKPYLGVVFVQFGSAGMAIIAKSALNKGMSQYVFVFYRMAVATLVFAPFAIVFDRKVRTKMTLPLFFKIVMLGLLEPVIDLNLYFTGMKFTTATFAVAMCNVLPAFAFLMAWACRLEKVNILKRGSQAKIIGTMVTVGGAMIMTFITGPMLNLPWTKPYHPSASSSSSSAGSANHQSPIKGSLMIAIGDISWSAFIILQMITLKSYPAELSLTALICLVGTIGGCGVALVMERGNPSAWAVHFDRQLLAVVYAGVMCSGVTYYIQGVVMKIKGPVFVTAFNPLSLILVAILSSFILSEIMFLGRIVGAVVIITGLYLVLWGKSKDQLLVKPESDKITSGKQQMIATTGEEGSKSVQSSQEFTALDVGKEDTK 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6343998 6347254 + Carg00278-RA Car04g01101 146526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01101 382 MobiDBLite consensus disorder prediction 348 382 - -
Car04g01101 382 MobiDBLite consensus disorder prediction 348 374 - -
Car04g01101 382 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020|GO:0016021
Car04g01101 382 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01101 Car-Chr4:6343998 Car09g00716 Car-Chr9:4243046 1.44E-115 dispersed
Car03g00388 Car-Chr3:4644935 Car04g01101 Car-Chr4:6343998 2.17E-16 wgd
Car04g01101 Car-Chr4:6343998 Car07g00952 Car-Chr7:5393100 3.78E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01101 - - csv:101206072 575.859