Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01102 ATGGTATACAGTATCAGGCTCGATTTCCCGTACGAATTTTACCAGAACGTACATAAGCCTTATGAAATGGAGAGCCATTCGGTTCTGCTGTACACGTGTACGGTAGATTACAAGATTGTAAAGTTATATAGTAGAACCGCGTCGTATAGGATCATTCGCTATAGTAAAAATACCAAAGCTCAGATTCTGTCGCTATCCAGTAGTCCCTCGGAAGTCCCTTTCTATTTCTTCTCACCCAGAGGAACATCGCGTGTTCCAACCTCCCCGGCAATTTCTCCGGCGAAGTCTTTCCAGCATAAAAGCTTTTGGATACCAAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGATAGCTCCTCCAGAATCGAAGCCAAACGTGGCCATCAATGGTTCATGGATGGCAGTGCACCAGAGCTATTCAGTAGCAAGAAGCAAGCAATAGAAACTGTAAATACTAGACCTGTTCCAGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAAGTTTTCAGTCAGTTCCTGGGCATTTCACTGATCGTCTTTTCGGCTCTGAGCCAGTACGAACTGTCAACTTGGTCGATAGAGGCATCACTGTTGGAAATGCAAATATGGACATGGGAAGAAAGGAGTATGAGAATCATTTTGCAAACAACCCATCCGTTGGCTTGTCCATGTCCCAATCCATTGAGGATTCCTCATCATGCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTCAATCAAGTCAGGGATCCTGACATTGGCATGTCTGCCTCTTTGGGACATGCCTATAGTAGGGGTGATAATGGTACAATTTCAATGGGTGCAACATTTAACAAAAACCACGAGCATGCCATTTCATTGGGCCATACATATAACAGTCGAGATGAGAATGCCATCTCGGTTGGCCCTGCATATCACAAGACAGACGACAGTTTCATTTCCATGGGTCATGCTTTCAGCAAGGGTGATGAGAATTTCATTACAATTGGTCCTAACTATAGCAAGGGAGACAATAGCATCCTATCGATGAGCCAGCCTTTTGACAAAGGGGATGACTCTTTTATTTCAATGGGTCAATCTTACGAGAAGGCAGAAGGTAATATCATTTCTTTTGGTGCCTCCTACAATAAAGGGCATGAAAATTTTATCTCAATGGGGCCAACCTATAGTAAGGCAGGCGATACTTTCATTTCAATGGCGCCCTCCTATAATAAGGGAAATGATGATAACTTGTCCATGGGTCCAACCTTTGACAAGGTAAACTCGGACGTTGTACATGTCGGTCCTAAATTTGACAAAGCCGATTCTGGTTCGGTGTCAATGATTCACAACTATCATAAAGGTGAGATTAATACCATATCTTTTGGAGGCTTTGATGATGAGAATGGGACAGGTAATCCTTCTGGTGGGATCATTAGCAGTTATGACTTGTTAATGGCTAATCAGGCTTCTGCCCAAGCATCAGAAGTATCAACCATGAGAGATTCAGTTCATCCCAATGTAGAAGTGAACATTAACAATGCCATAAAAGTTGATGCTAAAATCGACACAAGTTCCAAGATTAGAGAGCCGAGGACGACTAAGAAGGTGTCACCCAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCAACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTGAAAGGAACAATAAAAGGAACTGGATACTTGTGCAGCTGTGACAACTGCAATCATTCAAAGGCTCTCAATGCTTATGAGTTTGAGAGGCACGCTGGCTGCAAAACCAAACATCCAAATAACCACATTTACTTTGAGAATGGTAAAACTATCTATGCTGTTGTTCAAGAGCTAAAGAACACCCCTCAGGAGATGTTATTTGATGCAATTCACAATGTGACTGGCTCTCCCATTAATCAGAAGAACTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACTCTTGAACTCCAGCGTATTTATGGAAAAGATGAAGTAACTATGCCTTCTTGA 2037 42.22 MVYSIRLDFPYEFYQNVHKPYEMESHSVLLYTCTVDYKIVKLYSRTASYRIIRYSKNTKAQILSLSSSPSEVPFYFFSPRGTSRVPTSPAISPAKSFQHKSFWIPRDAGCLTDGEMNYDSSSRIEAKRGHQWFMDGSAPELFSSKKQAIETVNTRPVPGVPHMNVSPWENTSSFQSVPGHFTDRLFGSEPVRTVNLVDRGITVGNANMDMGRKEYENHFANNPSVGLSMSQSIEDSSSCLNFGGIRKVKVNQVRDPDIGMSASLGHAYSRGDNGTISMGATFNKNHEHAISLGHTYNSRDENAISVGPAYHKTDDSFISMGHAFSKGDENFITIGPNYSKGDNSILSMSQPFDKGDDSFISMGQSYEKAEGNIISFGASYNKGHENFISMGPTYSKAGDTFISMAPSYNKGNDDNLSMGPTFDKVNSDVVHVGPKFDKADSGSVSMIHNYHKGEINTISFGGFDDENGTGNPSGGIISSYDLLMANQASAQASEVSTMRDSVHPNVEVNINNAIKVDAKIDTSSKIREPRTTKKVSPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGTIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIHNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVTMPS 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6347091 6351449 - Carg00279-RA Car04g01102 146527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01102 678 Pfam Tify domain binding domain 571 626 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01102 Car-Chr4:6347091 Car14g00139 Car-Chr14:648141 3.05E-42 dispersed
Car02g00597 Car-Chr2:4517071 Car04g01102 Car-Chr4:6347091 6.25E-22 wgd
Car20g00370 Car-Chr20:2061582 Car04g01102 Car-Chr4:6347091 2.33E-39 wgd
Car04g00208 Car-Chr4:1159173 Car04g01102 Car-Chr4:6347091 0 wgd
Car04g01102 Car-Chr4:6347091 Car06g00270 Car-Chr6:1526693 3.55E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01102 - - csv:101206313 1092.8