Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01111 ATGGCCATTGAGGTTGTTGTCAAGGCTGCTACTGGTGCTCCCGATGTTCTTGGAGACTGCCCTTTCTGCCACAGGGTTCTTTTAACTTTAGAGGAGAAGAAAGTTGCTTATAAATTGCTTCTTGTCAATCTCTCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCTGTTGTGAAGTTTGATGGCAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGACAAGTATCCAGACCCTTCTCTTGTTACTCCTCCTCAATTTTCTTCTGTGGGATCAAAGATAAACGGTGCTTTTGTAAAATTCTTGTTGAGCAAGGACCCCAGTGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATATTGATATTGCTCTTGGCCATTTCAAGAAGTGGGTTTTCCCCGAAAACTTACGGAGTTTATCCGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGTCCCAGAACATGTCATTGCTGGTTGGGAGACCAAGGTGAATGCTGCTTGA 642 45.33 MAIEVVVKAATGAPDVLGDCPFCHRVLLTLEEKKVAYKLLLVNLSDKPSWFLEVSPEGKVPVVKFDGKWVPDSDVIVGILEDKYPDPSLVTPPQFSSVGSKINGAFVKFLLSKDPSDGSEQALLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHIDIALGHFKKWVFPENLRSLSAYKKLLFARESFVKTKAVPEHVIAGWETKVNAA 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6400060 6402272 - Carg00288-RA Car04g01111 146536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01111 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Car04g01111 213 Pfam Glutathione S-transferase, C-terminal domain 119 175 - -
Car04g01111 213 SUPERFAMILY GST C-terminal domain-like 99 209 IPR036282 -
Car04g01111 213 Gene3D - 90 212 - -
Car04g01111 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Car04g01111 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 2 208 IPR044627 GO:0033355|GO:0045174|GO:0098869
Car04g01111 213 Gene3D Glutaredoxin 1 89 - -
Car04g01111 213 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Car04g01111 213 SFLD Glutathione Transferase (cytosolic) 19 174 IPR040079 -
Car04g01111 213 PANTHER DEHYDROASCORBATE REDUCTASE 2 208 - -
Car04g01111 213 CDD GST_N_family 20 77 - -
Car04g01111 213 SFLD Main (cytGST) 19 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00219 Car-Chr4:1220319 Car04g01111 Car-Chr4:6400060 1.43E-118 dispersed
Car14g00753 Car-Chr14:4211907 Car04g01111 Car-Chr4:6400060 7.53E-93 transposed
Car04g00218 Car-Chr4:1218395 Car04g01111 Car-Chr4:6400060 1.16E-80 wgd
Car04g01111 Car-Chr4:6400060 Car06g00291 Car-Chr6:1626700 2.68E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01111 K21888 - cmax:111483829 374.785