Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g01111 | ATGGCCATTGAGGTTGTTGTCAAGGCTGCTACTGGTGCTCCCGATGTTCTTGGAGACTGCCCTTTCTGCCACAGGGTTCTTTTAACTTTAGAGGAGAAGAAAGTTGCTTATAAATTGCTTCTTGTCAATCTCTCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCTGTTGTGAAGTTTGATGGCAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGACAAGTATCCAGACCCTTCTCTTGTTACTCCTCCTCAATTTTCTTCTGTGGGATCAAAGATAAACGGTGCTTTTGTAAAATTCTTGTTGAGCAAGGACCCCAGTGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATATTGATATTGCTCTTGGCCATTTCAAGAAGTGGGTTTTCCCCGAAAACTTACGGAGTTTATCCGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGTCCCAGAACATGTCATTGCTGGTTGGGAGACCAAGGTGAATGCTGCTTGA | 642 | 45.33 | MAIEVVVKAATGAPDVLGDCPFCHRVLLTLEEKKVAYKLLLVNLSDKPSWFLEVSPEGKVPVVKFDGKWVPDSDVIVGILEDKYPDPSLVTPPQFSSVGSKINGAFVKFLLSKDPSDGSEQALLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHIDIALGHFKKWVFPENLRSLSAYKKLLFARESFVKTKAVPEHVIAGWETKVNAA | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6400060 | 6402272 | - | Carg00288-RA | Car04g01111 | 146536 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g01111 | 213 | SUPERFAMILY | Thioredoxin-like | 19 | 87 | IPR036249 | - | |
Car04g01111 | 213 | Pfam | Glutathione S-transferase, C-terminal domain | 119 | 175 | - | - | |
Car04g01111 | 213 | SUPERFAMILY | GST C-terminal domain-like | 99 | 209 | IPR036282 | - | |
Car04g01111 | 213 | Gene3D | - | 90 | 212 | - | - | |
Car04g01111 | 213 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - | |
Car04g01111 | 213 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 2 | 208 | IPR044627 | GO:0033355|GO:0045174|GO:0098869 | |
Car04g01111 | 213 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
Car04g01111 | 213 | Pfam | Glutathione S-transferase, N-terminal domain | 19 | 87 | IPR004045 | - | |
Car04g01111 | 213 | SFLD | Glutathione Transferase (cytosolic) | 19 | 174 | IPR040079 | - | |
Car04g01111 | 213 | PANTHER | DEHYDROASCORBATE REDUCTASE | 2 | 208 | - | - | |
Car04g01111 | 213 | CDD | GST_N_family | 20 | 77 | - | - | |
Car04g01111 | 213 | SFLD | Main (cytGST) | 19 | 174 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g00219 | Car-Chr4:1220319 | Car04g01111 | Car-Chr4:6400060 | 1.43E-118 | dispersed | |
Car14g00753 | Car-Chr14:4211907 | Car04g01111 | Car-Chr4:6400060 | 7.53E-93 | transposed | |
Car04g00218 | Car-Chr4:1218395 | Car04g01111 | Car-Chr4:6400060 | 1.16E-80 | wgd | |
Car04g01111 | Car-Chr4:6400060 | Car06g00291 | Car-Chr6:1626700 | 2.68E-09 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g01111 | K21888 | - | cmax:111483829 | 374.785 |