Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01134 ATGCAGTTATATCATCATCCATACTCTTTGAACAGCCAGAAGGTGAGACTTGCCCTGGAAGAGCAAGGCATCGACTACACGTCGTATCATGTCAATCCTATCACGGCCAAGAACATGGACTCCTCGTTCTTCAAGATGAACCCGAGTGCAAAACTTCCCGTCTTTCAAAATGGTTCCCATGTCATTTTCGACACGATCGAGATAATTCACGTTTTAAAGTCACTAACGGTGATACGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTAGGCTTCGACTGTTACAAATGGTATCAGAGCCAGACACTGGGCGGTGTGCGAGCGAGGACGTTGAGCCACCAAGGAGGGTGGATTGTGAGATCCCATATCGGTATATAGAGAGAATTGCAGTTGTATCCTCGGGAACCAACGACGTAACGCCGAGTAGCCAAGAAGTTGTTGAATGGATGCATAAGATACAACAATGGAATCCAAAATTTTTCACTCTCGCCCACGTCCCCGAGAAGTACCGACTTACCGTTACCAAATTTATAAGGCGTGTCGTTATCAGTCGGATGGCCGAAACTCCTGAAATGGCAGCTGCATACCATCATAAGCTCAGAGAAGCATATGAGACAGAAGACAAACTGAAAAACAAAACTGTTATCAAACAAAGCACAGATCATTTAGTGAGACTTCTCGACGAAATCGAGTCGAAGCTAGGCGAAACTGCATTCTTGGCAGGGGAAGAGTTCACCATGGCTGATGCCGTGCTCATCCCGGTGCTGGCTCGACTCGAGCTGTTGAAGGTGGCGGACGAGTATATAGGCAGCAGCAGCAGCAGACCAAACATTGCAGAATATTGGATGTTGGTGCAGCAGAGGCCAAGCTATAAGAAGGTGATTGGAAAGTATTTCAAGGGATGGAGAAAGCACAAAACACTTATGAAAACATGGTGCTTTCTTCATATCAGAACCTTGCTAAGGAGATATTGA 975 46.36 MQLYHHPYSLNSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKMNPSAKLPVFQNGSHVIFDTIEIIHVLKSLTVIRNGPKRTISASGRLRLLQMVSEPDTGRCASEDVEPPRRVDCEIPYRYIERIAVVSSGTNDVTPSSQEVVEWMHKIQQWNPKFFTLAHVPEKYRLTVTKFIRRVVISRMAETPEMAAAYHHKLREAYETEDKLKNKTVIKQSTDHLVRLLDEIESKLGETAFLAGEEFTMADAVLIPVLARLELLKVADEYIGSSSSRPNIAEYWMLVQQRPSYKKVIGKYFKGWRKHKTLMKTWCFLHIRTLLRRY 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6545582 6548701 + Carg00311-RA Car04g01134 146559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01134 324 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Car04g01134 324 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 172 308 IPR010987 -
Car04g01134 324 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Car04g01134 324 Pfam Glutathione S-transferase, C-terminal domain 215 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00068 Car-Chr2:437901 Car04g01134 Car-Chr4:6545582 1.57E-09 dispersed
Car04g01134 Car-Chr4:6545582 Car20g00100 Car-Chr20:541202 3.62E-13 dispersed
Car04g01134 Car-Chr4:6545582 Car09g00677 Car-Chr9:3975577 1.29E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01134 K22077 - csv:101222476 434.106