Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g01141 | ATGGCGCCATTGTTGCAGAGCTCTCAACCATGGGTGGAGAAATATCGACCGAAGCAAGTGAAAGATGTGGCGCATCAGGATGAAGTGGTTCGGGTCCTGACCAACACCCTCGAGACTTCCAGTTGTCCTCATATGCTCTTTTATGGACCGCCGGGTACCGGAAAAACCACCACCGCCCTCGCGATTGCTCATGAACTATTCGGTCCTGAACTTTACAAGTCCAGAGTTTTGGAATTGAATGCAAGTGATGACCGTGGGATTAATGTTGTTCGGACTAAGATAAAAGATTTTGCTGGGGTTGCTGTTAGCAGTGGCCAACGCCAGGGGGGTTATCCTTGCCCACCATTCAAGATAATCATTCTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACACGATTCTTTTTTATATGCAACTATATCAGCAGGTGA | 474 | 47.68 | MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISR | 157 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 6568753 | 6570147 | - | Carg00318-RA | Car04g01141 | 146566 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g01141 | 157 | CDD | AAA | 26 | 156 | - | - | |
| Car04g01141 | 157 | Pfam | ATPase family associated with various cellular activities (AAA) | 45 | 152 | IPR003959 | GO:0005524|GO:0016887 | |
| Car04g01141 | 157 | SMART | AAA_5 | 41 | 157 | IPR003593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g01141 | Car-Chr4:6568753 | Car15g00613 | Car-Chr15:3395071 | 1.21E-45 | dispersed | |
| Car04g01141 | Car-Chr4:6568753 | Car09g00683 | Car-Chr9:4003761 | 6.54E-14 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g01141 | K10755 | - | csv:101221224 | 317.005 |