Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01145 ATGTCGGCCCACTACCTCTGTCTCACCCTCCTCTCAATCCTCTTCATCGTCCCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTGCCCCATAGACTTCACCTACGTCCAAACCATCCCGTGGGACACTACCAGCTGCAACCGCCAAAACGCCGCCGCCCCCTGCTGTCAAACCCTTCTCAGCCTCTTCGGCATCGGCCTAGCCCAACACCTCAAAGACACTTCCCTTTTCCACCTCCCCAATTTCAAGTCCTCTTCTTCATGTCTCACCTCTTTCCAATCCAAGCTCTCTTCACTCTCCCTCCCTTCTTCTCTCATCCCCAATTGCTTCCAAAACCCATCTCAATTCGCCGCCAATTCCTCCAACTGTGCCGGAATTTTAAGTACTCACGATTGGGTTGCTAGAGTCGGCTCTACAACCCCAGTCGACACCGCGTGCGGTGGCGACTTGACTGGACTGACTCATTGCGGAACCTGTGTCGACGCCGGCATGAAACTCACCTCTCGCCTCATGGGTCTAGACCCAAATGGAACTAAGTGCTTTTATTTCACTGTTCTTTATGCTGCTGGAATTGCCAATGAATTCGGTCCTAAAGATACCAGAGTGGCTTCTTGTATTATGGGGTTGCCATTAAAGCCCTCAAAGATGAACAGAGCATCCCTTCTAAGCAGAAACGCTTTAATGGCGGTGGGTTTTGGGTTTACATTTCTCGCTGTAGTTGCGGTTTTGGTTTTGAGATCAAAGAAGAAATGGTTCAAAGAACAAGAACAAGAACAGAAACTCCGCCACTTTGGGGCGAAATGGTTCAGTATAACAGAGCTGGAAAAGGCCACAAATGGGTTTTCTCAGAGGAATCTAATCGGCCAAGGCGCCGATGGGTTCGTTTACAAAGGCAAGATTTCAGACGGAAGTTTAGTGGCAGTGAAACAAATCATTGATTTGGATTCAGAAAGGGACGAAGATTTCACAAACGAAGTCGAAATCATCAGCAAAATCAAACACAGAAATCTCCTATCTCTTAGAGGTTGTTGCATAGAAAACGACTCGAAATTCAAATCCCAGAAGAGAAAATTCTTAGTCTATGATTTCATGCCTAATGGAAACCTCAGCGATCATCTCTTCATCAAAAACAACAGCAAAAACCCATTAACATGGCCGCAGAGAAAAGGCATAATCATCGATATAGCAAGAGGACTAAATTACCTTCATTATGGAACCAAACCGGCGATTTACCACCGCGACATCAAACCCACGAACATCCTTCTGGACTCAGAATGGCGGGCTAGACTGGCGGATTTCGGCTTGGCAAAGCAGAGTAAAGAAGGTCAGTCGCATTTGACGACGAGGGTGGCCGGAACTCGTGGGTATTTGGCGCCGGAGTATGGTTTATACGGGCAGTTGACTGAGAAGAGCGATGTGTACAGCTTTGGGATTGTGATTTTGGAGATGATGAGTGGGAGGAAAGTGTTGGAGAGTTGGGATTTGATTACGGATTGGGCTTGGAAGCTTGTGGGGAATGTGGAAGCCATTTTTGAGGAATCGATCCGTGGAGAAGGGGCAAAAGGGGTAATGGAGAGATTTGTTCATGTGGGTTTGCTTTGTGCTCATGTGAATGTGGCCTTTAGACCCACCATTGATGAAGCTTTGAAGATGTTGGAAGGTGATATTGAAATTCCACAATTAACAAATCGCCCTTTGCCTCTTTCTCATCATTCCATGGTTTCTTTGCAATTTGCCCCTTCTTCATGTTCTTCTCACCATTTCATTGTATAG 1770 46.55 MSAHYLCLTLLSILFIVPSSSSSSSSLCPIDFTYVQTIPWDTTSCNRQNAAAPCCQTLLSLFGIGLAQHLKDTSLFHLPNFKSSSSCLTSFQSKLSSLSLPSSLIPNCFQNPSQFAANSSNCAGILSTHDWVARVGSTTPVDTACGGDLTGLTHCGTCVDAGMKLTSRLMGLDPNGTKCFYFTVLYAAGIANEFGPKDTRVASCIMGLPLKPSKMNRASLLSRNALMAVGFGFTFLAVVAVLVLRSKKKWFKEQEQEQKLRHFGAKWFSITELEKATNGFSQRNLIGQGADGFVYKGKISDGSLVAVKQIIDLDSERDEDFTNEVEIISKIKHRNLLSLRGCCIENDSKFKSQKRKFLVYDFMPNGNLSDHLFIKNNSKNPLTWPQRKGIIIDIARGLNYLHYGTKPAIYHRDIKPTNILLDSEWRARLADFGLAKQSKEGQSHLTTRVAGTRGYLAPEYGLYGQLTEKSDVYSFGIVILEMMSGRKVLESWDLITDWAWKLVGNVEAIFEESIRGEGAKGVMERFVHVGLLCAHVNVAFRPTIDEALKMLEGDIEIPQLTNRPLPLSHHSMVSLQFAPSSCSSHHFIV 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6592258 6594027 + Carg00322-RA Car04g01145 146570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01145 589 Pfam Protein kinase domain 281 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01145 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Car04g01145 589 ProSiteProfiles Protein kinase domain profile. 280 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01145 589 Pfam SPARK 23 179 IPR043891 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00497 Car-Chr4:2797613 Car04g01145 Car-Chr4:6592258 1.38E-18 dispersed
Car04g01145 Car-Chr4:6592258 Car12g00022 Car-Chr12:119249 2.40E-59 dispersed
Car16g00342 Car-Chr16:2094346 Car04g01145 Car-Chr4:6592258 2.04E-45 dispersed
Car04g01145 Car-Chr4:6592258 Car13g00461 Car-Chr13:6946609 2.25E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88800 PF00069 Pkinase 5.90E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01145 - - cpep:111787646 1098.96