Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01154 ATGGCGGAGGAGAGAGCGGTTTTCGATTGCGAAGCGGCGGAGAGAGTGGTGGCGGAGGTGAGGGAGAGCTATAATTCCGGGAAAACGAGAAGGTACGAATGGAGAGTGGAGCAAGTGAAGAATCTGTTGAAATTGGTGGATGAAAACCAGAGAGAGATGATCGATACGGTTCATTCCGACTTTTCCAAACCCGAATTCGAAGCCTTCGCTCATGAGACGGAGACGAAGGCGGAGGCGGAGGTGTATGACGCGTCGATGCAGGTGAAGGAGTTGAGAGAAAGTTTTGCCTCTGGAAAGACTCGGTGCTATAAGTGGAGAGTTTCGCAGCTTGAGAGTCTCTTCAAGCTTAGCGTTGTTCACGAGGAAGAGATCTGCGATGCGCTTCGCTCTGACCTATCCAAGCCTGTGATGGAAGCCATTATTCATGAGATAGCTTTGTTGAAAAATTCATGTAAATTGGCACTTAAAGAACTCAGGCGTTGGATGACGCCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTCTGGTATTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAGCAACATCATCTTTAATGGCAAAACTTTTAGGGAAATATTTGGATACTTCTGCTGTAAAAGTTATTGAGGGTGCTACTTCCGAAACTTCTGCTTTGCTGGAGCAAAAATGGGACAAAATATTTTACACAGGCAGTGGAAGAGTGGGGCGTATAGTTATGGCAGCTGCTGCCAAGCACCTTACACCAGTCGTTTTGGAGCTCGGAGGAAAATCTCCAGTAGTAGTTGATTCACAAATCAATTTACAAGTCGCGTGTAGGCGGATTATTGCTGGTAAGTGGGGTTGCAACAATGGGCAAGCATGCATTGCTCCTGATTATATCATAACTACGAAAGGCTTTGCTCCAAAATTGGTGGAGACTCTGAAACAAGAACTGGAGAGATTTTATGGAAAGAACCCTATGGAAACTAAAGATTTATCTCGCATTGTGAATGCTAACCACTTTGCTCGCTTGTCAAAGCTCTTAGATGATGATAAGGTTTCTGGCAAGATTGTGCATGGAGGTGAAAGGGACAAAGCCAAATTACAGATTACTCCGACCCTCTTATTGGATGTCCCTCGAGACTCTCTGATTATGACGGAGGAGATCTTCGGTCCCTTGCTTCCTATTCTCACGGTCGACAAAGTGGAGGATAGCTTCGAAGTAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACCAACAACAAGAGGCTCAAGGACCAGTTCGTAGCTTGCATCTCTGCAGGGGGTGTGGCCATCAATGACACCACCTTACATCTGACAGTTAGCACACTACCATTTGGAGGAGTTGGGGACAGTGGAATGGGATCTTACCATGGGAAGTTCTCATTTGATGCATTTAGCCATAAGAAGGCTGTTCTTTATCGAAGCTTCGCAGGCGATGCGCCGATGAGATACCCGCCGTACACGAAGGGAAAGCTAAGAATTCTCAAGGCTCTTCTTGGAGGTGACATATGGGGTCTCATTCGTGCTCTTTTTGGGTGGTCATAG 1632 46.02 MAEERAVFDCEAAERVVAEVRESYNSGKTRRYEWRVEQVKNLLKLVDENQREMIDTVHSDFSKPEFEAFAHETETKAEAEVYDASMQVKELRESFASGKTRCYKWRVSQLESLFKLSVVHEEEICDALRSDLSKPVMEAIIHEIALLKNSCKLALKELRRWMTPEKVKTSITTFPSSAAIVPEPLVLSLDPVVGAIAAGNAVVLKPSEISPATSSLMAKLLGKYLDTSAVKVIEGATSETSALLEQKWDKIFYTGSGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSQINLQVACRRIIAGKWGCNNGQACIAPDYIITTKGFAPKLVETLKQELERFYGKNPMETKDLSRIVNANHFARLSKLLDDDKVSGKIVHGGERDKAKLQITPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEVVNSGTKPLAAYLFTNNKRLKDQFVACISAGGVAINDTTLHLTVSTLPFGGVGDSGMGSYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGDIWGLIRALFGWS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6634160 6640821 - Carg00331-RA Car04g01154 146579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01154 543 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 276 283 IPR029510 GO:0016491
Car04g01154 543 Pfam Aldehyde dehydrogenase family 82 500 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01154 Car-Chr4:6634160 Car09g00694 Car-Chr9:4095549 0 dispersed
Car09g00700 Car-Chr9:4139793 Car04g01154 Car-Chr4:6634160 8.63E-10 dispersed
Car09g00702 Car-Chr9:4151719 Car04g01154 Car-Chr4:6634160 2.75E-06 dispersed
Car02g01034 Car-Chr2:7222911 Car04g01154 Car-Chr4:6634160 1.13E-91 transposed
Car02g01035 Car-Chr2:7225063 Car04g01154 Car-Chr4:6634160 1.53E-42 transposed
Car16g00681 Car-Chr16:4327933 Car04g01154 Car-Chr4:6634160 8.16E-150 transposed
Car04g01154 Car-Chr4:6634160 Car09g00693 Car-Chr9:4088216 3.48E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01154 K00128 - csv:101219329 764.607