Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01185 ATGGATTTCTATAGTGAAGGATCTCAAACAGACCACTTTGGTGGTGAATTAATGGAAGCAATTGTACCTTTTATCAAAGTTGCTTCCTCCTCCTCTTTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCAATTTCTCTCACTCTGTTCCTCAACAGTGCTCTAATGGCTGCTCCACTTCGATGAACTCAGAATTTTCAAATGGGTTCTCGACCCAAACCCTTATTGGGTACGAACAGCCATCTCAAATCTTCCATTTCCAAACCCCATTACCATTTGCTTATGGGAAACCAAGCGAACAGCTGAATCAACAAACGACGCCCATGTTCCTCTGCCCCAAGGCGATCCCGATGAAGCAAGTGGGTTCATCTTCAAAACCCACGAAGCTTTACAGAGGGGTAAGGCAACGGCATTGGGGGAAATGGGTGGCGGAGATCCGGCTACCACGGAACCGAACTCGGCTCTGGCTTGGCACCTTCGACACTGCTCAAGAAGCTGCGTTGGCGTATGACAAGGCAGCCTTCAAGCTACGAGGGGACTCTGCCAGGCTCAATTTCCCGCACCTCAAGCACCAAGGCTCCTGTGTTGAAGGCGAGTTCGGTGCGTATAGGCCTTTACATTCCTCTGTTGATGCAAAGCTCCAAGCAATTTGTGACAACTTGGCTGCGCCGCCGCCCAAAGGCAGCTCAAAGAAGTCAAGGTCCCAATCCTCCTCCTCCACGGTGGTGGAAGCGGCGGCTGTGAAGGTCGAGAGCGATGGGTCTGCAGGGTCTTCCCCATTATCAGATCTTACATTTCCTGACTTCACAGAGCTGCCATGGGAACACAATCAAGCTTGGGAGAATTCAATGCTTGAGAAATATCCTTCTGAGATAGATTGGGCTTCGATCTTGCCTTGA 909 49.39 MDFYSEGSQTDHFGGELMEAIVPFIKVASSSSFSVSSSSSSSSSSSFNFSHSVPQQCSNGCSTSMNSEFSNGFSTQTLIGYEQPSQIFHFQTPLPFAYGKPSEQLNQQTTPMFLCPKAIPMKQVGSSSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAQEAALAYDKAAFKLRGDSARLNFPHLKHQGSCVEGEFGAYRPLHSSVDAKLQAICDNLAAPPPKGSSKKSRSQSSSSTVVEAAAVKVESDGSAGSSPLSDLTFPDFTELPWEHNQAWENSMLEKYPSEIDWASILP 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6802992 6803900 - Carg00362-RA Car04g01185 146610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01185 302 MobiDBLite consensus disorder prediction 224 243 - -
Car04g01185 302 Pfam AP2 domain 134 182 IPR001471 GO:0003700|GO:0006355
Car04g01185 302 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01185 Car-Chr4:6802992 Car12g00137 Car-Chr12:789433 1.10E-93 dispersed
Car04g01185 Car-Chr4:6802992 Car09g00582 Car-Chr9:3296296 4.67E-152 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3333 PF00847 AP2 5.40E-15 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01185 K09286 - csv:101214560 402.519