Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01189 ATGAGGGGCGAAGAAGGGAATTCAGCTGAAGAGAATCTTGAAACAAAAGAGGGAACTCCATCTTCAGAGGATGAGAGATACATTCACAAAGTTTCAGTTCCACCAAAGCAGAAACTGTTCCAAGAAATCAAATCTGGAGTGAAAGAAACATTCTTCCCTGATGATCCTCTCCGTTCATTCAAGGATCAAACAAATCGCCGTAAATTTATCCTCGGAATCCGGGCCGTTTTCCCTATACTTGAATGGGGAAGAGATTACAATATCTCCAAGTTTAGAGGAGATGTCATTGCTGGACTCACCATTGCCAGTCTCTGCATTCCTCAGGATATTGGGTATGCAAAGCTTGCAAATTTGCCTCCAGAGTATGGATTATATTCAAGTTTTGTTCCACCATTAATCTATGCACTTATGGGTAGCTCAAGAGATATAGCCATTGGTCCAGTGGCTGTTGTTTCTCTCTTGTTGGGGGCAATGCTTCAAGCCGAAATCGATTCGGCTACGAACGCAGAAGAATACAGACGGCTGATTTTTACAGCTACATTCTTTGCAGGGATCACACAAGCCACCCTAGGAGTTCTAAGGTTGGGATTCCTAATTGACTTCTTGTCCCATGCTGCTATTGTTGGCTTCATGGGGGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATAAAGAATTTCACAAAGAAAACGGATATTATCTCGGTTATGCAGTCGGTATTCGGCACGATGCAACACGGATGGAACTGGCAGACAATAGTGATTGCTGCAACCTTCTTATGCTTTCTTCTATTTGCAAAATTCACTGGGAAGAGGAACAAGAAGCTGTTCTGGGTGCCTGCTATTGCTCCACTCATATCTGTTGTTCTGTCTACCCTTTTGGTTTACCTTACTCGTGCTGATAAGCAAGGGGTTGCAATTGTGAAACACATAAAGAAAGGAATCAATCCCCCATCTGTGAAAGAATTGTATTTCTCAGGTCAATACCTTCTGAAAGGGCTTAAGATCGGTGTCGTGGCGGGTATGGTAGCATTGACGGAAGCCGTAGCGATCGGAAGAACGTTCGCTGCAATGAAAGACTATCAAATCGATGGGAACAAGGAAATGGTAGCAATGGGAGTCATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTAGCAACAGGTTCATTCTCTCGATCAGCCGTAAACTACATGGCTGGCTGCCAAACTGCAGTATCCAACATTGTGATGTCCCTTGTAGTAGTCCTAACTCTGGCATTCATCACTCCACTTTTCAAATATACTCCAAATGCAATCCTATCTGCTATCATTATAAATGCTGTGATCAACCTGGTTGACTTGCATGCAGCGAAGTTGATATGGAAGATTGATAAATTTGATTTTGTTGCTTGTATGGGAGCCTTCCTCGGTGTCATCTTTTTCTCTGTAGAGATGGGGCTTCTAATTGCGGTATCCATTTCCTTCGCCAAAATCCTTCTACAAGTTACCAGACCACGGACTGCACTTCTTGGAAAGATCCCAAGGACAACCGTTTATAGAAACATACATCAATATCCCGAAGCAACCAAAGTTCCTGGCGTTTTGATTGTGAGAGTTGATTCAGCCATTTACTTTTCCAACTCAAATTACATCAAGGAAAGGATATTGAGATGGCTAGTTGATGAGGAAGAATTAACAAAAGAGTCCTACCAGAACAAAATCCAGTTTCTAATAGTTGAAATGTCACCTGTTACTGACATAGACACAAGTGGCATACATGCTTTGGAAGAGCTAAATGGAAGTCTCAAGAAACGAGAAATACAGCTGATTCTAGCCAATCCAGGGCCCGTGGTGATCCACAAGCTTCACGCATCAGAGTTTGCAGATTTGATAGGACAAGACCATATCTTTCTCACAGTAGCAGATGCAGTATCATCGTGCAGTCCTAAGATGATGAACGATGTTTGA 1965 42.85 MRGEEGNSAEENLETKEGTPSSEDERYIHKVSVPPKQKLFQEIKSGVKETFFPDDPLRSFKDQTNRRKFILGIRAVFPILEWGRDYNISKFRGDVIAGLTIASLCIPQDIGYAKLANLPPEYGLYSSFVPPLIYALMGSSRDIAIGPVAVVSLLLGAMLQAEIDSATNAEEYRRLIFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKTDIISVMQSVFGTMQHGWNWQTIVIAATFLCFLLFAKFTGKRNKKLFWVPAIAPLISVVLSTLLVYLTRADKQGVAIVKHIKKGINPPSVKELYFSGQYLLKGLKIGVVAGMVALTEAVAIGRTFAAMKDYQIDGNKEMVAMGVMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSLVVVLTLAFITPLFKYTPNAILSAIIINAVINLVDLHAAKLIWKIDKFDFVACMGAFLGVIFFSVEMGLLIAVSISFAKILLQVTRPRTALLGKIPRTTVYRNIHQYPEATKVPGVLIVRVDSAIYFSNSNYIKERILRWLVDEEELTKESYQNKIQFLIVEMSPVTDIDTSGIHALEELNGSLKKREIQLILANPGPVVIHKLHASEFADLIGQDHIFLTVADAVSSCSPKMMNDV 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6832847 6837287 - Carg00366-RA Car04g01189 146614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01189 654 ProSiteProfiles STAS domain profile. 523 646 IPR002645 -
Car04g01189 654 Coils Coil 559 579 - -
Car04g01189 654 MobiDBLite consensus disorder prediction 1 28 - -
Car04g01189 654 Pfam STAS domain 524 642 IPR002645 -
Car04g01189 654 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Car04g01189 654 Pfam Sulfate permease family 91 471 IPR011547 GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01189 Car-Chr4:6832847 Car19g00217 Car-Chr19:2118407 0 dispersed
Car16g00707 Car-Chr16:4503735 Car04g01189 Car-Chr4:6832847 4.99E-32 dispersed
Car04g02515 Car-Chr4:19934705 Car04g01189 Car-Chr4:6832847 5.15E-127 transposed
Car15g00671 Car-Chr15:3743521 Car04g01189 Car-Chr4:6832847 0 wgd
Car04g01189 Car-Chr4:6832847 Car04g02235 Car-Chr4:18102058 7.97E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01189 K17470 - csv:101207370 1120.15