Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01205 ATGTCACAAACAGAGGAGCCTCCAACCCAATCCATCAGCCCCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCGCGTTCGAGATTCCAGCAAGCATCCACTCTACCGCGGCGTCCGAATGCGCGCTTGGGGAAAATGGGTGTCCGAAATCCGCGAGCCCCGTAAGAAATCCCGCATTTGGCTCGGCACTTTCCCCACACCCGAGATGGCCGCTAGAGCCCACGACGTCGCTGCCTTATCCATCAAAGGCAACAATTCCGCTATTCTCAACTTCCCTGAACTCGCCCACTCCCTCCCCCGCCCTGCCTCCTTCGCCCCTCGCGACATCCAAGCCGCTGCCGCTAAAGCCGCGCACATGGACCCTTCCCAATACTCTGCTTCCTCCGCCGCCGCCGACGATTCCGACGACCTCGCAGAGATCATCAAACTCCCCAATCTAGGCACCAACTACGACCACTCCATCGGCAATAACGAATTTGTCCTCATGGATTCAAGCGAGAGCTGCTGGGCTTATCCGCCGCCCTGGGTTCGAACCATGGAGGATACAACGGAGGATGGTAATTTCTTGAGGGATTATTGA 585 58.12 MSQTEEPPTQSISPTSSSSSSSSSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASSAAADDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTTEDGNFLRDY 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6934587 6935171 + Carg00382-RA Car04g01205 146630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01205 194 MobiDBLite consensus disorder prediction 1 36 - -
Car04g01205 194 ProSiteProfiles AP2/ERF domain profile. 36 94 IPR001471 GO:0003700|GO:0006355
Car04g01205 194 MobiDBLite consensus disorder prediction 1 26 - -
Car04g01205 194 Pfam AP2 domain 35 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01205 Car-Chr4:6934587 Car12g00237 Car-Chr12:1595860 1.63E-68 dispersed
Car04g01205 Car-Chr4:6934587 Car09g00561 Car-Chr9:3186595 1.50E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3334 PF00847 AP2 4.30E-14 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01205 K09286 - csv:101217333 218.779