Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01227 ATGGCTCTGTCACCGAGCTGCAACTTGCTTCACTGTCGGTCGGTTTCTTCTTTGTCTTCTTCTTCTTCTTCTTCTTCCATTTCCGACCAAACAAGAGACGACTTTCCCGACATGTCGTCTCTACATTTCCTCTGTTTTCTCTCTCTCTTGAGCTTCCTCACCGGAATCAAGTCCGACGAGCGTCAAATCCTAACCGAACTCCAAACCAATCTCCAAAGCTCGAACACCAAGGTGTTCGAAAATTGGGGACACGAAACCCACATCTGCAACTTCACTGGAATCACCTGTAATTCCGACGAGTTCGTCACCGGAATTGACCTCTCCAAAAGGGGTTTATCAGGGGTTCTTCCATTTGATGCCATTTGTGAACTGAAATCATTGGAGAAGCTAGCTTTTGGGTCGAATTCCTTGCACGGCGGAGCAACGGAGAGCTTGAACAAGTGTGTCAAATTGAAATATTTGGATCTGGGTATCAATTCCTTCTCTGGGTCCTTCCCCGACATACATTCTTTGACGGAATTGCAGTATCTGTACTTGAATTTAAGTGGGTTTTCCGGGAAGTTTCCATGGAAATCCGTCGAGAATTTTACTGGGTTGATCGAGTTGAGCCTTGGCGATAACGCTTTCGACAACGCCACGTTTCCGGTGGAGGTCACAGCTTTGAAGAAGCTCACATGGCTTTACTTGTCGAATTGCAGCTTAACAGGGGAGATTCCGAGGGCTATTGGGAATCTTACAGAGCTTCGGAGTTTGGAATTCTCGGAAAATTACATCACCGGGGGAATTCCGGCGGAGATTGTGAATTTGCAGAATGTATGGCAGTTGGAGTTTTACGGTAATCAATTGACGGGGAAACTTCCGGCGGGGTTGAGAAACCTAACCCGGCTGAAGAATTTCGATGGTTCGATGAATTTTATAAGTGGGGATTTGTCGGAGGTGAGGTTTTTGACGAATTTGGTTTCTCTGCAACTGTTTGATAATGAAATCTCCGGCGGTGTTCCGGCGGAGCTTGGTGAGTTCAAGTCGCTGGTGGATCTTTCGCTTTATAGTAATCGGCTTACTGGTCCGCTGCCGCAATCGATTGGTTCTTGGTCGGATTTTGATTACATTGATGTATCTGAAAATTTCTTGTCGGGATCTATTCCGCCGGATATGTGTAAGAAAGGGACGATGAAGAAGCTTCTCATTCTTAAGAACAATTTCTCCGGCGAGATTCCGGCGACTTACGGTAATTGCTCAACTTTAACACGATTTAGAGTTAGTGAGAACTCGCTCACCGGTGTTGTGCCGTCTGGGATTTGGGGATTGCCGAATGTGAATATAATTGATCTTGCGTCAAATCAATTGGATGGTTCGATCACTTCTGATATTGGGAAGGCGGTGGCTCTCTCGGAATTACGCGTCGAGAATAATCGGTTATCTGGTCGTTTGCCATTGGAGATTTCGCAAGCGAAATCTCTTACTAAAGTTAGTTTGAGCAATAATGAGTTTTCTGGTGAACTTCCGGCAACTATTGGTGACTTGAAGCATCTCGACAGCCTCGAATTGCAGAGCAATAGATTCTCTGGTTTGATTCCGGAGACGATTGGCTCGTGTGATTCCTTGTCTATCGTCAATTTCGCAGAAAATTTGTTCTCGGGAAAAATCCCTTCCTCTCTAGGGTTTGTTGCGGTTCTAAATTCTCTGAATCTCTCCAATAACGCCCTCTCTGGTGAAATCCCCTCGACGTTTTCGCATCTGAAGTTGAGTGTTCTCGATCTTTCCAATAATCAGTTAACTGGTCCAGTGCCAGAATTGCTTGCGAATGGAGCTTACAAAGAAAGCTTCGCCGGAAACCCTGGCCTCTGTAGTGATGTTGATGGCGTTTTACAGCGATGTTCTCAGAGATCCGACGATTCCAAGCACGTTCGTACATTTGTTATCTGTTTCGCCGTTGGATTACTTCTTCTCAGCATAACAGTATGGTGCTTCATAACGTTGAAAAAGAGTGAAAAACACAAAGATTGGTCGCTTAAAGAGGAATCGTGGGACCTAAAATCCTTCCACGTAATGTCATTTACAGAGGACGAGATTCTCAATTCCATTAAAGACGAGAATCTAATCGGAAAAGGAGGTTCCGGCAATGTTTACAAAGTGACCGTCGGGAACGGGAAAGAGTTCGCAGTGAAGCATATATGGAACACCAATCCGTACGACGACAAGAGGAGGAACCGAAGCTCATCCCCCATTCTCCAAAAACAAAGAACGAAATCCTCAGAATTCGATTCAGAGGTGAAGACTCTAAGCTCAATCCGACATGTAAATGTGGTGAAGCTCTACTGCAGCATTACAAAATACGGGTATACCTACAAAGTCGACGAGAAGAGCGACGTGTACAGTTTCGGGGTCGTGTTGTTAGAGTTGGTGAGCGGGAAGAAGGCGATCGAGGCGGAGTTCGGGGAGAACAAGGACATAGTGGAATGGGGCTCCGACATCGAGACCGACAATGAGAAGCGTGGTCCAAATGCTACAAGAAGCCCAACCTTGTGGACGGTGGTTGGGAATTCTCTGCCGTCTGATTGGGATGGGAAATCGTTCTGTAACTTCACCGGCGTGAGCTGTAATGAAATGGGGTTTGTGGTGGGGATTGATCTTTCAGGTCGGGTGGTTTCCGGGAGGTTTCCGGCGGATGTTTGTTCTTATTTGCCGGAATTGAGAGTGCTCCGTCTTGGCCGGAGTGGGTTTCGTGGGACTTTTCCACATGGGATAATGAATTGCTCTGTTTTAGAAGAACTGGACATGACTTTTCTGTATCTAACAGGGACGCTACCGGATTTCTCGCCGTTGAAAAATTTAAGGATTCTCGACTTGTCGTACAACAATTTCACCGGCGACTTTCCGTTGTCGGTTTTCAATTTGACAAATCTCGAGAGGCTGAATTTCAATGAAGATAGTAATTTCAACACGTGGCAGTTGCCGGAGAGTATCTACGGCTTGACGAAGCTGAAATCAATGGTGTTGACGACATGTATGCTGGAAGGTCGGATTCCGGCGACGATTGGGAACATGACATCGCTCGTTGACCTCGAATTAAGCGGCAATTTCCTCGCCGGAAAAATCCCGAGAGAAATCGGAAATCTGAAGAATTTGAGAGACTTGGAGCTTTATTACAACTTTTTAATCGGCGAAATTCCAGAGGAGCTTGGGAATTTGACAGAACTCGTGGACTTGGACATGTCGGTCAACAAGTTGACTGGGAAGCTTCCAGAGTCGATTTGTCGTCTTCCTAAGCTGGAAGTTCTTCAGCTTTACAACAACAGCTTAACAGGGGAGATTCCAATTTCAATTTCGAATTCAACGACACTCACTATGTTATCCCTTTACGACAACTACATGACAGGACAAGTTCCAAGTAATTTGGGTCAATTCTCGCCGATGGTCGTTCTCGACTTGTCGGAAAATGATTTCTCCGGTCGGTTACCGACAGATGTCTGTGGAGAAGGTAAATTAATGTATTTTCTCGTGTTGCAAAACAAATTCTCCGGTGAAATCCCGCCGTCGTACGGTAAATGCCAGTCACTTTTACGGTTTCGTGTCAGTTCCAATTTATTAACCGGTCCGGTGCCGGAGGGGCTTCTGGGTCTTCCTCATGTTTCGATTATTGATTTCGGTAACAATAATTTAACCGGCGAGATTCCGAATTCTTTTGTGAAAGCTAGAAATCTCTCCGAGTTGTTCATGCAGAGTAATAAAATTTCCGGCGTGTTGCCGCCGGAAATTTCTGAAGCGACCAATTTGGTTAAGATTGATCTCAGCTACAATCTCTTGTCGGGCTCGATTTCTTCCGAAATTGGGAATCTCCGGCGGCTTAATTTGTTGCTTTTACAAGGAAATCAGCTGAATTCTTCAATACCCACTTCACTTTCTCAGCTGAAATCTCTGAATGTTCTTGATTTATCCGACAATCATTTGACCGGAAACATCCCGGAAAGCCTCTGCGAGCTGCTGCCGAATTCAATCAATTTCTCAAACAATCAACTCTCCGGTCCGATTCCTCTGTCTCTGATCAAAGGCGGACTCGCCGAAAGCTTCTCCGGCAACCCAGGACTCTGCGTTTCGGTTTATTTAGATTCCTCCGATCATAAATTCCCAATTTGTCCACAAAACTACAACAAAAAGCGGCTGAATTCCATCTGGGCAATCGGAATATCGGCGTTTATAATCTTCATCGGCGCTGCTCTGTATCTACGACGGCGATTCAGCAGAGAAAAATCAGTAATGGAACAGGACGAAACACTGTCGTCATCGTTTTTCTCATACGACGTCAAAAGCTTCCACCGAATTAGCTTCGACCCACGAGAGGTAATCGAATCAATGGTCGATAAGAACATCGTCGGCCATGGCGGCTCCGGCACGGTGTACAAAATCGAATTAAACAGCGGCGAAATCGTCGCCGTTAAACGGCTATGGAGTCGGAAGGGGAAGGATACGACGTCGGATCAAGATCAATTGTATTTGGATAAGGAATTAAAAACAGAGGTGGAGACCTTGGGGAATGAAATGATTCAAGTTCTGAGGATTGCAATTCGTTGCACGTATAAGAATCCCGCCCTTCGACCTACCATGAAGGAAGTGGCTCAGTTGTTGATTGAAGCCGACCCTTGCAAATTCGATTCTCAAAATAACAAATGCTCGAAACACGCCACCGCCAAAATCAAGAACAACCCATTTGAGCTATGA 4719 45.62 MALSPSCNLLHCRSVSSLSSSSSSSSISDQTRDDFPDMSSLHFLCFLSLLSFLTGIKSDERQILTELQTNLQSSNTKVFENWGHETHICNFTGITCNSDEFVTGIDLSKRGLSGVLPFDAICELKSLEKLAFGSNSLHGGATESLNKCVKLKYLDLGINSFSGSFPDIHSLTELQYLYLNLSGFSGKFPWKSVENFTGLIELSLGDNAFDNATFPVEVTALKKLTWLYLSNCSLTGEIPRAIGNLTELRSLEFSENYITGGIPAEIVNLQNVWQLEFYGNQLTGKLPAGLRNLTRLKNFDGSMNFISGDLSEVRFLTNLVSLQLFDNEISGGVPAELGEFKSLVDLSLYSNRLTGPLPQSIGSWSDFDYIDVSENFLSGSIPPDMCKKGTMKKLLILKNNFSGEIPATYGNCSTLTRFRVSENSLTGVVPSGIWGLPNVNIIDLASNQLDGSITSDIGKAVALSELRVENNRLSGRLPLEISQAKSLTKVSLSNNEFSGELPATIGDLKHLDSLELQSNRFSGLIPETIGSCDSLSIVNFAENLFSGKIPSSLGFVAVLNSLNLSNNALSGEIPSTFSHLKLSVLDLSNNQLTGPVPELLANGAYKESFAGNPGLCSDVDGVLQRCSQRSDDSKHVRTFVICFAVGLLLLSITVWCFITLKKSEKHKDWSLKEESWDLKSFHVMSFTEDEILNSIKDENLIGKGGSGNVYKVTVGNGKEFAVKHIWNTNPYDDKRRNRSSSPILQKQRTKSSEFDSEVKTLSSIRHVNVVKLYCSITKYGYTYKVDEKSDVYSFGVVLLELVSGKKAIEAEFGENKDIVEWGSDIETDNEKRGPNATRSPTLWTVVGNSLPSDWDGKSFCNFTGVSCNEMGFVVGIDLSGRVVSGRFPADVCSYLPELRVLRLGRSGFRGTFPHGIMNCSVLEELDMTFLYLTGTLPDFSPLKNLRILDLSYNNFTGDFPLSVFNLTNLERLNFNEDSNFNTWQLPESIYGLTKLKSMVLTTCMLEGRIPATIGNMTSLVDLELSGNFLAGKIPREIGNLKNLRDLELYYNFLIGEIPEELGNLTELVDLDMSVNKLTGKLPESICRLPKLEVLQLYNNSLTGEIPISISNSTTLTMLSLYDNYMTGQVPSNLGQFSPMVVLDLSENDFSGRLPTDVCGEGKLMYFLVLQNKFSGEIPPSYGKCQSLLRFRVSSNLLTGPVPEGLLGLPHVSIIDFGNNNLTGEIPNSFVKARNLSELFMQSNKISGVLPPEISEATNLVKIDLSYNLLSGSISSEIGNLRRLNLLLLQGNQLNSSIPTSLSQLKSLNVLDLSDNHLTGNIPESLCELLPNSINFSNNQLSGPIPLSLIKGGLAESFSGNPGLCVSVYLDSSDHKFPICPQNYNKKRLNSIWAIGISAFIIFIGAALYLRRRFSREKSVMEQDETLSSSFFSYDVKSFHRISFDPREVIESMVDKNIVGHGGSGTVYKIELNSGEIVAVKRLWSRKGKDTTSDQDQLYLDKELKTEVETLGNEMIQVLRIAIRCTYKNPALRPTMKEVAQLLIEADPCKFDSQNNKCSKHATAKIKNNPFEL 1572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7048174 7060054 - Carg00404-RA Car04g01227 146652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01227 1572 Pfam Leucine Rich Repeat 223 245 IPR001611 GO:0005515
Car04g01227 1572 ProSitePatterns Protein kinases ATP-binding region signature. 1458 1480 IPR017441 GO:0005524
Car04g01227 1572 Pfam Leucine rich repeat N-terminal domain 58 97 IPR013210 -
Car04g01227 1572 Pfam Leucine rich repeat N-terminal domain 850 868 IPR013210 -
Car04g01227 1572 ProSitePatterns Protein kinases ATP-binding region signature. 701 723 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01227 Car-Chr4:7048174 Car09g00543 Car-Chr9:3084391 4.33E-11 dispersed
Car04g01227 Car-Chr4:7048174 Car09g00542 Car-Chr9:3080351 3.50E-17 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01227 - - csv:101222864 1172.53