Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01247 ATGCCGCACAGAACGACTTATTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCAGCGTCAACTTCCAAACAGATTTTGGATCACGAGAAGAAAATCAACAAGGACACTTTAAGTACCGAAAGTGACGCGAAACCGACCCCGCGGCCTGCTCGCGACTTTAGTGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGTCTCAAAGCAAGAAGAAACTGCCTGCTCTTTACGATTGGTTGGTGAACAAGAAAGCAACACGATCAGCAACCGCTCACGTGAAAACTTGGCTTTCCAATTGCGATGAGGACCGCGAGCTTTTGCTTCCTCCACCTACCTCGGAACCAGATCATGATACAAAGAATGTTGAGGATCGGAGTGTTGACCGGCGCTTTGACCGGGAAGTTTCACTGCCTAGATTATCAAGCGAGAGTAGCTATGCAGGGAGTTTGTTTTCAGGCACGGGAACGGGGACTGTGGATGGCAACTTTTCCAGCGATGTTAAGGATTCATCGGTGTCGAAGATATTGTCCACGCGCACGGCGAGGCCGGAAGAGATTGTGGATGGAGATGGTGAGGAAAGCCTAGCGCAAAGAACGAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCAACGCTTCGTTCTCATGCTAGTCTCGCTGGCGATCCCGTGCTTATGGAGGAAGGCAGGGTGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTATGGGTAAGTGGTTGCCTGTCTTACTCCGACAAAATTTCCGATGGTTTCTACAATATTTTGGGTATGAACCCGTATCTTTGGGTTATGTGCAATGATTTTGAGGAAGGTAGACGGCTACCACCTCTGATGTCACTTAAAACCATTGAACCGAGTGAGACGTCAATGGAGGTGGTTCTTGTGGATAGACGTGGGGACTCTCGACTGAAGGAGCTTGAAGAGAAAGCACAAGAACTATATTGTGCTTCAGAGAACACCGTAGTGTTGGTGGAAAAACTAGGAAAACTTGTTGCGATCTACATGGGGGGCACTTTCCCGGTGGAGCAAGGGGGTTTGCACCTCCATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTTCAGCAATGCATTGTGCTACCAATCGGTAGTCTATCTATGGGATTATGCAGGCACCGTGCAATACTTTTTAAGAAATTGGCAGATTATATAGGTTTGCCGTGTCGGATAGCTAAAGGTTGTATGTACTGTGTTGCTGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAGTACGTTGTTGATTTAGTGGGGGAACCAGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGCTCCAATCTTCAATGCCTTCACCACTTCACATTTCTCATTTAAAAGAGTTCCAAGAACCTTACGTGGAAAGTTGTTTAAGCCGTCAAATTGTTGGGTCAAAGCAAACCTGTGGTTCTCCGGATAATCCTCTACATTCAGGCCTTGGAGAGCGCCGGATGAGAGGGGGAAGCTCGTTATATAAAAATTCAGGGACTGGAACTGATAAATTGGTTGATCAAGCTGTTGGTGTGAGATCATCTCAGCTGTGTTTGGAAACTAAAGTGAGCGAGGAGTGTGCACTTCAGAGTCATATATTGGCACCCACTGACGCTGATGCCTCTAAGAACTTGGGTTCTGTTGCTGGTGCATCTTTACATGAAAACGCAGTTGTCATTGAAGAAATATACAGAAAAGAGGAAGTTGTGGTGGGAATTTCACTCGATGAATCTAGCATTGATCCGTCCAACTTAAGCTTGTCAACTCAAATTGATTCAAAAGAGGTTGAGAGTAGGTCTCGAAATTGTTCAGCATCAACACATCCAAAATATCTGATACTTGAACCATCTCTTGCAATGGATTGGCTGGAAATTTCATGGGATGAATTACATATAAAGGAGCGTGTTGGAGCTGGCTCATTTGGAACAGTGCACCGTGCTGAATGGCATGGATCGGACGTTGCTGTCAAGGTTTTAAGCGTGCAGGATTTCCAAGACGATCAGTTGAAGGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTCCGCCATCCGAACGTGGTACTCTTCATGGGTGCAGTTACTAAGAGACCTCATCTTTCAATAGTGACTGAATATCTGCCTAGGGGTAGTCTATACCGCCTAATTCACAGGCCATCCTCTGGTGAACTGATGGATCAAAGGAAACGATTGCGAATGGCGTTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCCATAGTACACTGGGATCTTAAATCCCCCAATTTGTTGGTTGACAAAAATTGGACGGTCAAGGTTTGCGACTTTGGGTTGTCCAGATTCAAAGCCAACACTTTCATATCATCGAAATCTGTAGCTGGAACTCCTGAGTGGATGGCTCCAGAATTCCTTCGTGGAGAGCCTTCAAATGAGAAGACTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTCACCATGCAACAACCGTGGAGTGGGCTTGGCCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCTATACCACCAAACACTTCCCCGTTGGTGTCTTCCCTTATTGAATCTTGCTGGGCAGATGACCCTGTTCAGCGCCCATCATTTGCAAGTATAGTCGAGTCCCTGAAGAAATTGCTCAAATGTCCCCAGCAGTTGATAGTAATGGGAGGAACGATGAGCTATCTTATCGTCGATTTATGGAAAATCTCCATTTCCTCGCAACATTCAGGATTGCCCACCCGTTTTCCAATCTGCGTTGAGGACATTATCGGACTTCTTACAGCATTGAACGACAAGTCCACGAACTTTAAGTTCGTCACTTATTATGGGTTTCCGCATTGTTGCTCTCAAACGGTATCATCTCACAGCTTCCTCTATTCCCACATGATTGATTTTGGTTTTGAAGGGTTTGAATGTTGA 3018 45.86 MPHRTTYFFPRQFPDRGFDSASTSKQILDHEKKINKDTLSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKSQSKKKLPALYDWLVNKKATRSATAHVKTWLSNCDEDRELLLPPPTSEPDHDTKNVEDRSVDRRFDREVSLPRLSSESSYAGSLFSGTGTGTVDGNFSSDVKDSSVSKILSTRTARPEEIVDGDGEESLAQRTKESYYLQLALAATLRSHASLAGDPVLMEEGRVEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNDFEEGRRLPPLMSLKTIEPSETSMEVVLVDRRGDSRLKELEEKAQELYCASENTVVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQQCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIAKGCMYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGLQSSMPSPLHISHLKEFQEPYVESCLSRQIVGSKQTCGSPDNPLHSGLGERRMRGGSSLYKNSGTGTDKLVDQAVGVRSSQLCLETKVSEECALQSHILAPTDADASKNLGSVAGASLHENAVVIEEIYRKEEVVVGISLDESSIDPSNLSLSTQIDSKEVESRSRNCSASTHPKYLILEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLSVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKTDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPNTSPLVSSLIESCWADDPVQRPSFASIVESLKKLLKCPQQLIVMGGTMSYLIVDLWKISISSQHSGLPTRFPICVEDIIGLLTALNDKSTNFKFVTYYGFPHCCSQTVSSHSFLYSHMIDFGFEGFEC 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7220740 7230407 + Carg00425-RA Car04g01247 146672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01247 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Car04g01247 1005 ProSitePatterns Protein kinases ATP-binding region signature. 660 681 IPR017441 GO:0005524
Car04g01247 1005 MobiDBLite consensus disorder prediction 19 59 - -
Car04g01247 1005 MobiDBLite consensus disorder prediction 25 40 - -
Car04g01247 1005 MobiDBLite consensus disorder prediction 109 129 - -
Car04g01247 1005 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Car04g01247 1005 MobiDBLite consensus disorder prediction 495 524 - -
Car04g01247 1005 ProSiteProfiles Protein kinase domain profile. 654 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01247 1005 Pfam Protein tyrosine and serine/threonine kinase 654 908 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01247 Car-Chr4:7220740 Car06g00385 Car-Chr6:2099585 0 dispersed
Car04g01247 Car-Chr4:7220740 Car09g00527 Car-Chr9:2961597 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88803 PF07714 PK_Tyr_Ser-Thr 1.30E-63 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01247 - - csv:101204522 1642.09