Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g01251 | ATGGCCAGACCTCAAAGGCAATATCGTGGCGTAAGACAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGTCATCCTTCGTTGAAGACGAGGATTTGGCTTGGAACATTTGAAACGGCGGAGGATGCAGCTAGGGCTTATGATGAAGCGGCGAGATTAATGTGTGGACCAAACGCAAGAACGAATTTCCCGTACAATCCGAACACGATTCAGTCGTCGAATTCCAAGATCTTGTCGGCCAATTTGACTGCGAAATTGCATAGATGTTATATGGCTTCTTTGCAGATTAGTAACCAGGAGTTCAAAAGAGAACTTCCGCCGCCGTTTGCGGCGGCGTCTTATGCCGATGCGGCGAGATCGATGGTGGAGGAGAATCGACCAACGGCGCCCGAGGCGGCGGAGCAAGAGGAACTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGA | 492 | 48.37 | MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARSMVEENRPTAPEAAEQEELKLLEDDHIEQMIEELLYYGSMEFCL | 163 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7250674 | 7251244 | - | Carg00429-RA | Car04g01251 | 146676 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g01251 | 163 | Pfam | AP2 domain | 7 | 56 | IPR001471 | GO:0003700|GO:0006355 | |
Car04g01251 | 163 | ProSiteProfiles | AP2/ERF domain profile. | 7 | 64 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00150 | Car-Chr1:768968 | Car04g01251 | Car-Chr4:7250674 | 1.24E-50 | dispersed | |
Car04g01251 | Car-Chr4:7250674 | Car05g00302 | Car-Chr5:1680751 | 1.21E-61 | dispersed | |
Car04g01272 | Car-Chr4:7380535 | Car04g01251 | Car-Chr4:7250674 | 2.26E-30 | dispersed | |
Car12g00340 | Car-Chr12:2145444 | Car04g01251 | Car-Chr4:7250674 | 1.40E-61 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3339 | PF00847 | AP2 | 2.30E-12 | CL0081 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g01251 | - | - | csv:101216179 | 224.172 |