Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01255 ATGCCTCTTTGCGTACCATTCTCCCGGACCCCAAATCCCACCACCACCCACCACCACCCGCCGCAAACGGCACCGAATTGGCTTAACAACGCACTTCTCCGTAACCAAAACCCCCATTCTCACTACTCTACCGACACTACCACCACCGCCACCGCCGCCGTCAATACCAATTTCCTCAACCTTCACACCACTGCATCCGATTCCACTGTTTCTCACTCCTCTAACCAATGGCTCTCCCGTCCGATTCTCCAAAGAAACCACAGCGATGTTATTGATGATGTCGCCGCTGCCGGTGACGCAATGATCGGTGCCGCTAACGATGCCAATAGCGGCGATGGATTGAACAAAAGCGACGGCATGGCGGTGGAACCTGGCGGCGGCGGCGGTGGTGGTGGTGGAGAAGGGGTTTTGAATTGGCAATATGCTCGTTTCAAAGCCGAGATTCTTGCTCATCCGCTTTATGAACAGCTGCTTTCAGCTCATGTCGCTTGTCTTCGCATCGCCACGCCCGTCGACCAATTGCCGAGGATTGACGCACAGCTCGCTCAGTCGCAGAATGTTGTCGCTAAGTACTCCGCCTTGGGCCACACCGCGCCGCTCATGGTCGGCGACGACAAAGACCTCGATCAATTCATGCAAAGTTGTATTGTTTTCACTACATTAGGAGTTTCACCCGGCGAAGGCACGGGAGCGACAATGTCGGACGACGACGACGACCAGGTCGATAGCGATGCAAATTTGTTCGAAGCGAGCTTAGATTGTCCTGACACCATGGGATTTGGGCCTCTTATTCCCACAGAAACTGAGAGGTCCTTGATGGAAAGGGTCAGACAAGAACTGAAGCATGAACTAAAAGCGGGTTACAAGGAGAAAATTGTGGATATAAGGGAAGAAATTCTGAGAAAAAGGAGAGCTGGAAAGCTCCCTGGTGATACCACCTCTGTTCTAAAACAATGGTGGCAATCACATTCAAAGTGGCCTTATCCTACTGTAAGTTGA 999 52.15 MPLCVPFSRTPNPTTTHHHPPQTAPNWLNNALLRNQNPHSHYSTDTTTTATAAVNTNFLNLHTTASDSTVSHSSNQWLSRPILQRNHSDVIDDVAAAGDAMIGAANDANSGDGLNKSDGMAVEPGGGGGGGGGEGVLNWQYARFKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGHTAPLMVGDDKDLDQFMQSCIVFTTLGVSPGEGTGATMSDDDDDQVDSDANLFEASLDCPDTMGFGPLIPTETERSLMERVRQELKHELKAGYKEKIVDIREEILRKRRAGKLPGDTTSVLKQWWQSHSKWPYPTVS 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7284554 7287105 + Carg00433-RA Car04g01255 146680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01255 332 MobiDBLite consensus disorder prediction 8 23 - -
Car04g01255 332 Pfam ELK domain 279 300 IPR005539 GO:0003677
Car04g01255 332 MobiDBLite consensus disorder prediction 1 23 - -
Car04g01255 332 ProSiteProfiles ELK domain profile. 279 299 IPR005539 GO:0003677
Car04g01255 332 Pfam KNOX1 domain 145 185 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01250 Car-Chr2:8441825 Car04g01255 Car-Chr4:7284554 4.12E-36 dispersed
Car04g01255 Car-Chr4:7284554 Car05g00310 Car-Chr5:1707821 2.73E-147 dispersed
Car12g00335 Car-Chr12:2114504 Car04g01255 Car-Chr4:7284554 5.39E-100 wgd
Car04g01255 Car-Chr4:7284554 Car09g00379 Car-Chr9:2088126 1.21E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01255 - - bhj:120085761 500.745