Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01259 ATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGAGAGTGTTCCAGCATCCAAAATTTATGCTCCTGAGTCCCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTATGCGTAGGGGTTATTGGGAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGCTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTACAAAGGCAGTTTAA 549 47.91 MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKAV 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7305690 7307481 + Carg00437-RA Car04g01259 146684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01259 182 Pfam ATP synthase subunit C 112 171 IPR002379 GO:0015078|GO:0033177|GO:1902600
Car04g01259 182 Pfam ATP synthase subunit C 29 87 IPR002379 GO:0015078|GO:0033177|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01259 Car-Chr4:7305690 Car05g00238 Car-Chr5:1328960 3.21E-21 dispersed
Car12g00295 Car-Chr12:1945666 Car04g01259 Car-Chr4:7305690 2.18E-109 wgd
Car04g01259 Car-Chr4:7305690 Car05g00344 Car-Chr5:1977152 1.91E-109 wgd
Car04g01259 Car-Chr4:7305690 Car09g00416 Car-Chr9:2303645 6.18E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01259 K03661 - twl:119992947 318.161