Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g01259 | ATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGAGAGTGTTCCAGCATCCAAAATTTATGCTCCTGAGTCCCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTATGCGTAGGGGTTATTGGGAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGCTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTACAAAGGCAGTTTAA | 549 | 47.91 | MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKAV | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7305690 | 7307481 | + | Carg00437-RA | Car04g01259 | 146684 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g01259 | 182 | Pfam | ATP synthase subunit C | 112 | 171 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Car04g01259 | 182 | Pfam | ATP synthase subunit C | 29 | 87 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01259 | Car-Chr4:7305690 | Car05g00238 | Car-Chr5:1328960 | 3.21E-21 | dispersed | |
Car12g00295 | Car-Chr12:1945666 | Car04g01259 | Car-Chr4:7305690 | 2.18E-109 | wgd | |
Car04g01259 | Car-Chr4:7305690 | Car05g00344 | Car-Chr5:1977152 | 1.91E-109 | wgd | |
Car04g01259 | Car-Chr4:7305690 | Car09g00416 | Car-Chr9:2303645 | 6.18E-06 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g01259 | K03661 | - | twl:119992947 | 318.161 |