Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01328 ATGGGATGGTTTCTCTGTACTGGAGGTTCAAATAAGAGGGGAAAACAGCAGCAGCAGCAGCAGCAGCAGGTTCAGAAGAAGGACGATGATCCGATCCCATCGGCTTCAGGTAAATTTATGAACAATGTTCAACAATTTATCGCTCTCATTTGCGTTCAATTGGAGATTCTACTCGAGTTTTTATGCAAATGTACACTGCGGAGTTTAGTTTACTCAACTTTGGATAGGAAATCCATCGGCAATGGCAATGGTCTTGCCATTTATGGGGATTTGCAAGGATTTGAATGGGAGAACGAGGCTCTAAAAGATGAAGGTTCTGATCAGATTGCAGCACAAACAATTACATTCTCATTCCGAGAGTTGGCAGCTGCAACAAAGTATTTTAGAGCCGACTGTCTTTTAGGTGAAGGAGGTTTTGGTCAAGTATATAAAGGACGATTGGAGAGCATAAACCAGGTAGTTGCCATCAAGCAACTTGATCGAAATGGGCTACAAGGAAACAGGGAATTTCTCGTTGAAGTACTAATGTTAAGCCTACTCCATCATCCAAATCTTGTTAATTTAATTGGCTATTGTGCGGATGGCGATCAAAGACTCTTGGTTTATGAATACATGCCATTGGGATCGTTGGAAGACCATCTACATGATCTCCCACCCGACAAGAAACGACTTGATTGGAATATAAGAATGAAAATAGCTGCTGGTGCTGCAAAAGGCTTAGAGTACTTGCATGACAAAGCTAACCCCCCAGTTATATATCGTGATCTGAAATGCTCTAACATCCTGCTTGGTGAAAATTACCATCCTAAGTTATCCGATTTTGGTTTGGCAAAATTAGGCCCCGTGGGGGATAACACTCATGTGTCCACAAGAGTGATGGGAACGTATGGATACTGTGCTCCTGAATATGCAATGACAGGCCAGCTCACTTTAAAATCAGATGTTTATAGCTTTGGAGTTGTTCTGCTTGAAATTATTACTGGCAGAAAAGCCATTGACAATTCAAGAGCCGCAGGGGAACATAATTTGGTGGCCTGGGCACAACCCTTATTTAAAGACAGAAGGAAGTTTCCACAGATGGCCGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTATATCAAGCTCTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGTCCCCTCATCGCCGATGTCGTCACGGCCCTCACATATCTTGCCTCCCAAAAATGCGATCCTGAAACGCAGCCAGTTCAAAGCGCCCGCAGTAGCTCGTCCACACCTAGATCTTCTAGAAGAGAACTTTGCATTCCAGATGCTCCTCTACTCTCCCCCAGAAATAGGTCTCCCTGTGGATTTGCTGTTGATTCAAGTTGTGAATGTATACACTTTGAATTGCAAAAGCTTTCAAGCATTCTTACACCACCACCGCCGCCGCCGCCGCCGCCGCCGGCCGCCTATGCCTTCTGCATTTTCATTCTTTTTAGTTCTCAGCAATGA 1497 44.49 MGWFLCTGGSNKRGKQQQQQQQQVQKKDDDPIPSASGKFMNNVQQFIALICVQLEILLEFLCKCTLRSLVYSTLDRKSIGNGNGLAIYGDLQGFEWENEALKDEGSDQIAAQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWNIRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGENYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAQPLFKDRRKFPQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALTYLASQKCDPETQPVQSARSSSSTPRSSRRELCIPDAPLLSPRNRSPCGFAVDSSCECIHFELQKLSSILTPPPPPPPPPPAAYAFCIFILFSSQQ 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7690763 7694963 + Carg02074-RA Car04g01328 146753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01328 498 MobiDBLite consensus disorder prediction 413 432 - -
Car04g01328 498 MobiDBLite consensus disorder prediction 10 29 - -
Car04g01328 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Car04g01328 498 Pfam Protein tyrosine and serine/threonine kinase 133 345 IPR001245 GO:0004672|GO:0006468
Car04g01328 498 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Car04g01328 498 MobiDBLite consensus disorder prediction 413 431 - -
Car04g01328 498 MobiDBLite consensus disorder prediction 1 31 - -
Car04g01328 498 ProSiteProfiles Protein kinase domain profile. 128 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01328 Car-Chr4:7690763 Car06g01271 Car-Chr6:9107178 0 dispersed
Car04g00240 Car-Chr4:1334393 Car04g01328 Car-Chr4:7690763 0 wgd
Car04g01328 Car-Chr4:7690763 Car06g00292 Car-Chr6:1634804 2.32E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88805 PF07714 PK_Tyr_Ser-Thr 7.50E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01328 - - csv:101221705 672.544