Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01351 ATGTCGAATTCCGATTCTGGCAACACCAATGGGGTCTCCAATGGCGCCGCCGTTGATACCCACAAAAACCAGCCTTCTTCAAATGGAGCCCTCGTCGTCAAAAAGCCCCCCTCCAAGGACCGCCACAGCAAGGTCGATGGTCGTGGCCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGTTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCCATTATTGCCGCTACTGGCACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCTACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGTCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTCCGGTCCGATGACGACGGCGGTAAGGACGATGGGGCGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGATTCCAGCAAGACCCGATTATGGGCAGGTGTGGAGTTTTGCCGCCGCGGCTCCCTCGGAAATGGTGGTTCAACCCGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCCCAACCGCAGCAGCCGATTAGAGAAGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCAGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGACGGGAAGATGACCCTCGCTGA 753 59.23 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAGVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLNLLASLSGGGGSGRREDDPR 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7823374 7824126 + Carg02051-RA Car04g01351 146776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01351 250 MobiDBLite consensus disorder prediction 110 169 - -
Car04g01351 250 Pfam TCP family transcription factor 38 124 IPR017887 -
Car04g01351 250 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
Car04g01351 250 MobiDBLite consensus disorder prediction 1 31 - -
Car04g01351 250 MobiDBLite consensus disorder prediction 110 136 - -
Car04g01351 250 MobiDBLite consensus disorder prediction 35 50 - -
Car04g01351 250 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01351 Car-Chr4:7823374 Car04g02171 Car-Chr4:17624847 1.31E-98 dispersed
Car18g00741 Car-Chr18:8490719 Car04g01351 Car-Chr4:7823374 2.90E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3349 PF03634 TCP 3.60E-33 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01351 K16221 - csv:101206050 384.8