Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01353 ATGTCTCGGAAATCCCAGGTGATGCCTTCATTGCAAGCTACGAAATCCATGCCAGTTAATTCTCGGTTCATGATTCCGCAAACTGCTGAAACTTTGGAAGAGCCTTATAAGCAGAATGTGAAAAACATGGAAGGTAGATCGATAGTTGATGGGGCAAATGGTGTTGCCAGAGATGATGGCGTCAATCTACTTCAATACAGTATGAACAATATTGATGAGCTGAATGAGGACTCACCATATAGTTACAATATTACAACAGTGGAAGAAAGACCCATCGTGGATAATGGAGAAGATGGTTTTATGCCTTTACCTTCACCTTCAATGTCGGCTTCACAGAGTGAACGCAGGTGGGGTGACACATCCTCCTACACGCCAAGGAAGATACTCAAGTCTTGGTTTAAACTTCCAAATGGAAATTGGGATCTTGTAAAGATACTGTCAACGGCGGGAACAGAGTCAGTTGTTTCACTGACTGATGGAAAGGTGTTAAAGGTGAAAGCTGAAGATTTGATTCCTGCAAATCCGGATATCCTTGATGGCGTTGATGATCTTATGCAACTTAGCTATTTAAATGAGCCTTCAGTATTATATGATCTTGAGTACAGATATAATCAAGATATTATATATACAAAAGCAGGACCAGTTCTGGTTGCTATCAATCCTTTTAAGAAAGTTGATTTGTATGGAAATGATTACATTGAAGCATATAAACGCAAAACAATTGAGAGCCCACACGTATACGCCATTACGGATACAGCCATAAGAGAGATGATTCGAGATGAAGTAAATCAATCAATTATAATAAGCGGTGAAAGTGGAGCTGGAAAAACTGAAACAGCAAAGATAGCAATGCAATACTTGGCGGCCCTTGGCGGTGGAAGTGGAATAGAATACGAGATATTAAAGACCAATCCTATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGATAACTCAAGCCGTTTTGGAAAATTGATAGAAATCCATTTTAGTGAAACTGGGAAAATATCCGGTGCAAATATTCAAACTTGTAAATCTATTAGTCTACCCTTCGATGTGCCTGATTTGATTCCATTTTTATTTTTATATTTTATAAGACTACTTGAGAATGATATATTTCTTCAACAGTCCAGAGTTGTCCAATGCACAGAGGGAGAGAGGTCATACCACATCTTTTATCAACTTTGTAGTGGGGCTCCGCCTGCACTTAAAGAGAGGCTAAACTTGAGAAGAGCGGAAGAGTACAAATACCTCAGCCAGAGCAGTTGTATTTCAATAAGTAGAGTAAATGATGCGGAGGAGTTTCGTGTAGTCATGGAAGCACTAGATGTCGTACATATTAGTAAAGAAGACCAGCACAGTGTATTTGCAATGCTTGCTGCTGTTCTTTGGCTGGGAAATGTTTCCTTTAGTGTGATAGACAATGAAAATCATGTGGAGGCTGTGGAAGATGAAGGTTTACAGACTGTCGCTAAACTTATTGGGTGCGAGATTGAGGAGCTTAAACTAGCTCTATCAACTCGAAAAATGAGAATAGGGAACGACAGCATTGTCCAAAAGCTTACTTTATCTCAGGCAAGAAACTTGTTCAGGAAAACCTTACTTTATATTTTATCTACATCAAAGGTGAGTGATTTTGGTGGAAAGATTTCATTTTTGTCGTTCTTTGACTTGCAGGCAATTGACACTAGAGATGCTTTGGCAAAGTCAATTTACGCTTGTTTGTTTGAGTGGCTGGTCGAACAAATTAACAAATCTCTTGCTGTAGGCAAACGGCGCACTGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTTGATAGGAATAGTTTTGAACAGTTCTGTATTAACTATGCAAATGAGAGACTACAGCAGCATTTCAATCGTCATTTATTTAAGCTGGAGCAGGAGGAATATATTCAAGATGGAATCGACTGGGCAAAAGTTGATTTCGACGACAACCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTGTTGTCCCTGTTAGATGAGGAGTCTACTTTTCCAAATGGCACAGATGTGACCTTTGCGAACAAGCTTAAGCAGCATTTGACACCCAATCCTTCTTTTAGAGGAGAACGAGAGAAAGCCTTCACTGTCTGTCACTATGCAGGAGAGGTCACTTATGACACAACTGGTTTTCTGGAGAAAAACAGGGACTTACTACATTTAGATTCCATACAACTCCTATCCTCATGTTCATGTCATCTTCCTCAAATTTTTGCATCCAACATGCTAACTCAATCGGGAAAGTCCATAGGTGGCCCTTTACATAAGTCTGGTGGTGCAGAATCCCAAAAACTAAGCGTCGCAAGAAAGTTTAAGGGTCAATTATTCCAATTGATGCACCGTCTTGAAAATACAACGCCCCATTTCATCCGTTGCATCAAGCCCAACAATGTTCAGTCTCCCAGATTGTCGGAGCAAGGACTTGTATTACAACAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTACGAATATCACGAGCTGGTTTTCCCACCCGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTTCTTCTGCAAGAAAGCATTGCATCGCAGGATCCACTAAGTGTCTCAGTTGCGATTCTTCATCAATTCAATATATTGCCGGAAATGTACCAAGTTGGCTATACAAAATTGTTCTTCCGAACTGGACAGATTGGAATGCTTGAAGATACAAGAAACCGCACCCTCCATGGGATTCTCTGTGTTCAAAGCTGTTATAGAGGGCACCTAGCTCGTCGCCATCTCAAAGAGCTGAAGAAAGGGATTTTCGTACTTCAGTCATTTGCACGTGGGGAGAAAACCAGAAAAGAATATGCAATCTTGATACGAAGGCATAGGGCTGCTATTTCTATTCAGAAGTGTGTGAAAGCCAGAATTGCTGAAAAACGTTTGAAGAAAGTCTGTGATGCATCACTTCTGATACAATCGGGTAAAGAACCTGTTCTTAAATGTTCTACTGGATTTATCCGTGGCTGTTTGGTCAGGAGATGCTCAGGAGATATAGGATTAATGAAACCTGGTGGCCTGACGGCAAACGAGTCAGGTGAGGTGCTTGTTAAGGCATCATTCCTTTCAGAATTACAGCGCCGTGTCCTGAAGGCAGAGGCTGCTTTGAGGGAGAAAGAAGAGGAAAACGACATCCTCCACCAGCACCTCCAGCAGTACGAGAATCGTTGGTCAGAGTATGAGCTGAAAATGAAATCAATGGAAGAGGTGTGGCAGAGACAAATGAGATCCCTGCAGTCTAGCCTCTCCATTGCAAAGAAAAGCTTAGCAGTTGATGATTCAGAGAGAAATTCTGATGCATCAGTCAATGCAAGTGATGACAGAGGATACAGTTGGGAAGTGGGTAGCAACAACACAACTAATGAAAGCAATGGAGTAAGACCAATGAATGCAGGTCTCAGTGTCATTAGCCGCTTGGCCGAAGAATTCGAACAAAGAAGTCAAGTCTTCGGCGACGATGCCAAGTTCTTAGTAGAGGTAAAATCCGGTCAAGTCGAGGCAAGTCTTGATCCAGATAGGGAACTAAGAAGGTTGAAGCAGATGTTTGAAGCATGGAAGAAAGATTACGGGGGAAGGTTGCGCGAAACAAAAGTGATTTTGAATAAGCTTGGGAATGAAGGTGCCATGGATAGAGTGAAAAAGAAATGGTGGGGAAGGAGAAACAGCACAAGGTATAGTTAA 3747 41.18 MSRKSQVMPSLQATKSMPVNSRFMIPQTAETLEEPYKQNVKNMEGRSIVDGANGVARDDGVNLLQYSMNNIDELNEDSPYSYNITTVEERPIVDNGEDGFMPLPSPSMSASQSERRWGDTSSYTPRKILKSWFKLPNGNWDLVKILSTAGTESVVSLTDGKVLKVKAEDLIPANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDIIYTKAGPVLVAINPFKKVDLYGNDYIEAYKRKTIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCKSISLPFDVPDLIPFLFLYFIRLLENDIFLQQSRVVQCTEGERSYHIFYQLCSGAPPALKERLNLRRAEEYKYLSQSSCISISRVNDAEEFRVVMEALDVVHISKEDQHSVFAMLAAVLWLGNVSFSVIDNENHVEAVEDEGLQTVAKLIGCEIEELKLALSTRKMRIGNDSIVQKLTLSQARNLFRKTLLYILSTSKVSDFGGKISFLSFFDLQAIDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDVTFANKLKQHLTPNPSFRGEREKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQIFASNMLTQSGKSIGGPLHKSGGAESQKLSVARKFKGQLFQLMHRLENTTPHFIRCIKPNNVQSPRLSEQGLVLQQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQESIASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGMLEDTRNRTLHGILCVQSCYRGHLARRHLKELKKGIFVLQSFARGEKTRKEYAILIRRHRAAISIQKCVKARIAEKRLKKVCDASLLIQSGKEPVLKCSTGFIRGCLVRRCSGDIGLMKPGGLTANESGEVLVKASFLSELQRRVLKAEAALREKEEENDILHQHLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRGYSWEVGSNNTTNESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILNKLGNEGAMDRVKKKWWGRRNSTRYS 1248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7834978 7847107 + Carg02049-RA Car04g01353 146778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01353 1248 Pfam Myosin head (motor domain) 375 530 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g01353 1248 Pfam Myosin head (motor domain) 181 345 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g01353 1248 Pfam Myosin head (motor domain) 561 901 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g01353 1248 ProSiteProfiles Myosin motor domain profile. 179 913 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g01353 1248 MobiDBLite consensus disorder prediction 1132 1148 - -
Car04g01353 1248 ProSiteProfiles IQ motif profile. 917 942 IPR000048 GO:0005515
Car04g01353 1248 Coils Coil 1044 1092 - -
Car04g01353 1248 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car04g01353 1248 Pfam IQ calmodulin-binding motif 919 936 IPR000048 GO:0005515
Car04g01353 1248 MobiDBLite consensus disorder prediction 1115 1148 - -
Car04g01353 1248 ProSiteProfiles IQ motif profile. 938 967 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01353 Car-Chr4:7834978 Car09g00813 Car-Chr9:4925737 0 dispersed
Car18g00742 Car-Chr18:8498004 Car04g01353 Car-Chr4:7834978 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01353 - K10357 csv:101222101 2110.88