Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01382 ATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGCACGAATTAAAAAGATAATGCAAGCAGATGAGGACGTTGGAAAGATAGCACTTGCAGTGCCCGTTTTAGTTTCTAAAGCATTGGAACTGTTCCTGCAAGACCTGTGTGACCGTACATATGAGATAACTCTACAAAGAGGAGCGAAGACAATGAATTCGTTGCACCTAAAGCACTGTGTACAAAGCTATAGTGTTTTCGATTTTCTGAGGGATATTGTTAGTCGGGTTCCAGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAAAGGAGGAAACCCCTTGCTGATGAAAGCAATGACATTGATGAGATGAAGAAGAGCAAGACGCATGACATGAGCCATGGTAGCACTGGTAGAGGAAGAGGAAGGGGACGAGGACGGGGTCGTGGACGACCTGCTCGATCAGTCGAAAAGGACAACTTCCAACCTAACCCCGACGTCGACCCTTGCACATCTATAGAGAACACGAACAAGAACCCCAACCAAGATGTGCACATGGAGCCTCACATTGAGCCTAGTGAAACACCAAAAGAAGTAGGCGAAGACAATCAAACTATCCAAAACATCGATCTTAATGCCGATGTCAATGCTAGCAAAGACTCGAAGACTGCGCCAGCAGCAATGTCAGATGTACCTGTAGAACCAGCTGAGCCTACTACTACCGAGTCCGAGGCTAAAGCAGCTGACGAATTCCCTGCCTGGCCTCTCTCTGATGTGGACAAAATGGCAATTGACCCTCTCCAATATGCACATCTCAGCACAAGAGTAGACGAGGAAGAGGAAGATTATGATGAAGAGGAGTAA 846 46.45 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTAPAAMSDVPVEPAEPTTTESEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8009972 8014046 + Carg02019-RA Car04g01382 146807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01382 281 MobiDBLite consensus disorder prediction 90 246 - -
Car04g01382 281 MobiDBLite consensus disorder prediction 90 132 - -
Car04g01382 281 MobiDBLite consensus disorder prediction 159 177 - -
Car04g01382 281 MobiDBLite consensus disorder prediction 178 192 - -
Car04g01382 281 MobiDBLite consensus disorder prediction 193 217 - -
Car04g01382 281 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Car04g01382 281 Coils Coil 263 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01382 Car-Chr4:8009972 Car19g00234 Car-Chr19:2355197 4.53E-12 dispersed
Car05g00364 Car-Chr5:2096022 Car04g01382 Car-Chr4:8009972 1.32E-11 transposed
Car20g00114 Car-Chr20:644347 Car04g01382 Car-Chr4:8009972 4.05E-70 transposed
Car18g00761 Car-Chr18:8658074 Car04g01382 Car-Chr4:8009972 1.09E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3353 PF00808 CBFD_NFYB_HMF 2.10E-19 CL0012 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01382 K21752 - csv:101209714 454.907