Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01385 ATGGGAAAGCTAAGCTTTAGATTCCTTGAGAATTCAAAGCCTTACTTTGCCATGATATCCTTACAATTTGGATATGCTGGCATGAACATCATCTCTAAGGTCTCTCTTAGTAGAGGGATGAGTCATTACGTCCTCGTCGTTTATCGACACGCCTTTGCTACCGCTTCCATTGTTCCCTTCGTTCTCTTCTTCGAACGGAGAGGACAACCGAGGATAACACTCAAAGTTTTCATTCAGATATTTGTGTTGGCTTTGCTCGGCCCGGTAATCGATCAAAATTTCTACTACGCCGGGTTGAAATATACTTCCCCGACGTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTCGTGATGGCTGTGATCTTCAGGATGGAAAATTTGGAGATGAAGAAACTGAGATGCCAAGCAAAAGTTTTGGGAACCTTAGTGACAGTGGGTGGAGCAATGGTGATGACTTTGTACAAAGGTCCACTTGTTCAAATGCCTTGGTCTAAACATTCTCATCACTCTAATCAAGCCTCCGATGATAAAGCCAACAAAGATTGGTTCAAAGGCTCCATGTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTCTTGCAGAATCAGGCATTGAAGACATACAAGAACCACCAATTCACTCTCACTACACTTGTATGCTTTGTTGGGACTTTGCAAGCCATAGCTGTGACATTAGTAGCCGAGCACAAAGCTGTCGTTTGGAGAATTGGTTGGGATATGAACCTCCTCGCCGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATACTATGTACAAGGGCTAGTGATGAAAAAGAGGGGACCTGTATTTGCAACTGCATTTAGTCCTTTGATGATGATAATCGTGGCCATCATGGGCTCTTTCATCCTCGCTGAAAAGATATTTCTCGGAGGGTAA 936 43.91 MGKLSFRFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIVPFVLFFERRGQPRITLKVFIQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMENLEMKKLRCQAKVLGTLVTVGGAMVMTLYKGPLVQMPWSKHSHHSNQASDDKANKDWFKGSMFLIIATLAWASLFVLQNQALKTYKNHQFTLTTLVCFVGTLQAIAVTLVAEHKAVVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAIMGSFILAEKIFLGG 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8029678 8031676 - Carg02016-RA Car04g01385 146810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01385 311 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020|GO:0016021
Car04g01385 311 Pfam EamA-like transporter family 187 308 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01385 Car-Chr4:8029678 Car14g00458 Car-Chr14:2404580 1.01E-143 dispersed
Car04g02281 Car-Chr4:18354766 Car04g01385 Car-Chr4:8029678 1.04E-09 dispersed
Car03g00997 Car-Chr3:7951343 Car04g01385 Car-Chr4:8029678 3.72E-142 transposed
Car18g00757 Car-Chr18:8626769 Car04g01385 Car-Chr4:8029678 4.16E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01385 - - csv:101206648 554.673