Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01395 ATGGATCGATTTCCCAATGATCTCGACGAAGAAATATGCATCGCGGAGAAATTTGAGAGAGAGGAAGACGACGACGACGACGACGACGACGAGGAGGAGCAAGAAGATGGAGAAGACGACTGGGATGATTGGAATGCAGATGAGGAAGGAAGCGAAGAAGCATTTGATTCGAATTTTCTGTGTCTGTTCTGCAACTCGAAATATAATGACTGCGAAACGCTGTTCAACCACTGCAACTCGGTTCACTACTTCGATTTTCACGGCATCAGGAGGACTCTGGGTTTAGACTTTTATGGTTCGTTCAAAGTTATCAACTACATACGATCTCAGGTAGCAGAAAACAGATGTTGGAGCTGTGGTTTCTTGTGTCAATCAAACCAGGATTTACAGAACCATTTACACAAAACACTAAATCTCAGTGACGTAAAGGCTCTTTGGAATGATGATAAATATCTAAATCCCTTCAGGCAAGACGATCCGCTCCTGTACAGTTTTGCAGAAGACGAAGAGGATGATGAAATTTCACTCATCAACAATGATCTTCAGAGGAATGCGGGTATTGATGGAGGTAATTGCAATCATGATGAAATGAGTAGAGAAAATCTTCCATTTCATCCAAACCAAAACAAGGAAAATGGAATGGAAGATTGTTGTTCATCTTTACATGGTTATTTGAATGCTCCAAGCAACTTAGAGGCTGAGATTGAGAATACTGTGAAAACCACGGAAATCTTGGGACTGAAAGACGATCAATTAAAAATAGCCAGACGAAATGTTGATAGAATGGATATCAAGAATGCAAATGTAAATTACTTTGATTCATATAGCTCTTTTGGCATACACAGAGAGATGTTAAGCGACAAGGTCAGAACGGAAGCCTATATGCATGCTATTTTGCAAAATCCATCGCTCTTCCACAATGCAGCTGTGATGGATGTAGGCTGTGGAACAGGCATACTCAGTCTCTTTGCTGCAAAAGCGGGTGCATCGAGAGTTCTTGCGGTTGAAGCGAGTGAAAAGATGGCTGCAGTGGCCACCCAAATTGCTAAAGACAATGGGCTCTGGCGGAACGGGAAACAGACTGGAGATTGTGGCGTGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTTGATAAGAACATAGAGATTCAGCCTCACAGTGTTGACGTATTAGTGAGTGAATGGATGGGGTATTGCTTGCTGTATGAGTCAATGCTGAACTCAGTTCTCTTTGCAAGGGATCGTTGGTTGAAGCCTGGAGGTGCAATCTTACCAGATACTGCCACAATTGTAAGTCTGCACTATCAAGGATTTGGAGCTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTTGGGAAGGAACTTGTAAAGGATGCTGCCAAAGCTCCCATTGTTGACATTGTGGATGCTAATGATTTGGTAACTAGTACTGCAATTCTCCATACTTTCGATCTTGCAACTATGCATCCTGATGAAGTAGACTTCACTGCAAGCACGGACTTGGAACCAAATTTACATTATCCTTCAAGCAACTCAGATGATGTTGAAGTAGAAGCATCTTGGTGTCATGGAGTTGTCCTATGGTTTGAAACTGGTTTCACAAGCAGATTTTGCAAGGAATCGCCGGCTGTTCTGTCTACATCTCCGCACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCACAGAGCCAATTGCTATAACATCTAGAAAATCTGCCACCAAAAAATCAGCACCAGTTGGTAGCCATGCCTCCCCTGCTGTCAAAGTTCATTTACGCCTTAGCATTGTCCGTGCGCCCGAACATCGAAGCATTGATATTTCACTAGAGACTACTGGGATTGCTGCTGATGGTCGGAACCGCGACTGGCCTGTACAACTTTTCACATTAAGATAG 1938 42.98 MDRFPNDLDEEICIAEKFEREEDDDDDDDDEEEQEDGEDDWDDWNADEEGSEEAFDSNFLCLFCNSKYNDCETLFNHCNSVHYFDFHGIRRTLGLDFYGSFKVINYIRSQVAENRCWSCGFLCQSNQDLQNHLHKTLNLSDVKALWNDDKYLNPFRQDDPLLYSFAEDEEDDEISLINNDLQRNAGIDGGNCNHDEMSRENLPFHPNQNKENGMEDCCSSLHGYLNAPSNLEAEIENTVKTTEILGLKDDQLKIARRNVDRMDIKNANVNYFDSYSSFGIHREMLSDKVRTEAYMHAILQNPSLFHNAAVMDVGCGTGILSLFAAKAGASRVLAVEASEKMAAVATQIAKDNGLWRNGKQTGDCGVSSGTIEVVHGMVEELDKNIEIQPHSVDVLVSEWMGYCLLYESMLNSVLFARDRWLKPGGAILPDTATIVSLHYQGFGAGGTSLPFWENVYGFSMSCVGKELVKDAAKAPIVDIVDANDLVTSTAILHTFDLATMHPDEVDFTASTDLEPNLHYPSSNSDDVEVEASWCHGVVLWFETGFTSRFCKESPAVLSTSPHTPKTHWSQTILTFTEPIAITSRKSATKKSAPVGSHASPAVKVHLRLSIVRAPEHRSIDISLETTGIAADGRNRDWPVQLFTLR 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8092744 8096463 - Carg02006-RA Car04g01395 146820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01395 645 Pfam Methyltransferase domain 310 425 IPR041698 -
Car04g01395 645 ProSitePatterns Zinc finger C2H2 type domain signature. 61 82 IPR013087 -
Car04g01395 645 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 268 599 IPR025799 GO:0016274|GO:0018216
Car04g01395 645 MobiDBLite consensus disorder prediction 15 46 - -
Car04g01395 645 Pfam C2H2 type zinc-finger (2 copies) 61 135 IPR041661 -
Car04g01395 645 MobiDBLite consensus disorder prediction 16 46 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01395 Car-Chr4:8092744 Car10g00631 Car-Chr10:3213299 7.03E-68 dispersed
Car18g00780 Car-Chr18:8799628 Car04g01395 Car-Chr4:8092744 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01395 K11436 - csv:101215999 1003.82