Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01414 ATGTCAGCCAAGTTACAACAGATTGATCAAAAGGGTGGTGGTTCAGGTACCCAGAAAAGGCTGAAGGATCTCACATCTCAGTCAGCCAATAAATTCTGTGCAGATTGTGGGTCTCCAGATCCAAAATGGGTGTCTTTGAATTTGGGGGCATTTATTTGCATCAAGTGTTCTGGAGTACACCGAAGCCTCGGAGTGCATATATCTAAGGTTCTTTCAGTGAAGCTAGATGATTGGACAGATGAACAAGTTGATGCTTTGACGAGTATAGGTGGAAATACTGCCGTAAACAAAAAGTACGAAGTTTTCATCCCAGACAGCGATAAGAAACCAAAACCAGACTCATCCATAGAGGAGCGTTTGGACTTTATAAGGAAAAAATATGAGCTACTGCAATTCGCAAGTCTTGACGACCAGATTTTCTGTCCTTTTCCACCCCCGCAGAAGAAATCATCATTCTGGCATAGCATTTCTTATAATGGAAGCGAAGAAAGGAGGAATTACGAAAAACTACCGACAAAAACTCGAATCGGAAGTGCATTCCGGAACAGCTGGGTAAGAAAAGATTCTGAACCGAAGAACAACAAGAAGGGAAATGCATTGGTATTAAGCAGCTCAATGGCAGGTATGATTGAATTCGTTGGTTTAATTAAGGTCAACGTAGTTAGAGGAACCAATTTAGCTATCAGGGATATGGTGACAAGCGACCCATATGTAATTCTATCGTTGGGCAACCAATCAGTGAAGACACGAGTCATCAAGAGCAGTTTGAATCCAGTGTGGAATGAGAGCCTAATGCTGTCAATTCCTGATCACATTCCTCCATTAAGAGTGATTGTGTATGACAAAGACACATTTTCAACCGACGACTTCATGGGTGAAGCAGAAATTGATATCCATCCACTGCTCTCGGCAGCCCAAGCCTGTGAGAGATCCACAGCCAGTGAACCGATGCAGCTAGGAAAATGGGTAGCATGCAAGGAGAACACTCTTGCAAAGGATGGCATCATCACTCTCGTAGATGGGAAGATCCGACAAGACATCTCTTTGAAGCTGCAGAACGTCGAACGAGGCGTGCTGGAGATGGAGCTTGAATGTGTTCCTCTTTCTCAGTAG 1113 43.67 MSAKLQQIDQKGGGSGTQKRLKDLTSQSANKFCADCGSPDPKWVSLNLGAFICIKCSGVHRSLGVHISKVLSVKLDDWTDEQVDALTSIGGNTAVNKKYEVFIPDSDKKPKPDSSIEERLDFIRKKYELLQFASLDDQIFCPFPPPQKKSSFWHSISYNGSEERRNYEKLPTKTRIGSAFRNSWVRKDSEPKNNKKGNALVLSSSMAGMIEFVGLIKVNVVRGTNLAIRDMVTSDPYVILSLGNQSVKTRVIKSSLNPVWNESLMLSIPDHIPPLRVIVYDKDTFSTDDFMGEAEIDIHPLLSAAQACERSTASEPMQLGKWVACKENTLAKDGIITLVDGKIRQDISLKLQNVERGVLEMELECVPLSQ 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8209689 8213039 - Carg01987-RA Car04g01414 146839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01414 370 MobiDBLite consensus disorder prediction 1 20 - -
Car04g01414 370 Pfam Putative GTPase activating protein for Arf 19 133 IPR001164 GO:0005096
Car04g01414 370 Pfam C2 domain 215 307 IPR000008 -
Car04g01414 370 ProSiteProfiles C2 domain profile. 196 312 IPR000008 -
Car04g01414 370 ProSiteProfiles ARF GTPase-activating proteins domain profile. 18 132 IPR001164 GO:0005096
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01308 Car-Chr3:9994085 Car04g01414 Car-Chr4:8209689 1.87E-43 dispersed
Car04g01414 Car-Chr4:8209689 Car18g00794 Car-Chr18:9040590 0 dispersed
Car04g01414 Car-Chr4:8209689 Car15g00768 Car-Chr15:4349247 3.87E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01414 K12486 - csv:101221541 623.239