Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01476 ATGAACTGTCTTCAAAACCTTTCAATATCATCATCTTTGCCGTTCCAGAGCTTCAAATGCCGACAGAGAAAGCCTGAATTCCAGCTCCGCAATCTGGTGATAAGGAACTTTGCGGATCTACACCGACGTTTTACCGTGAAGGCAGTATCTGGCTCTACATCAAGTGCCGAAATGAGTGGAGCGGAAGTTGATGATGCCGAGGAAAAGGAGGAAAAATCTGAAATATATAGCCATAACATGACAGAAGCTATGGGGGCTGTATTGACATATAGACATGAGCTGGGAATGAACTACAACTTCATTCGTCCAGATTTAATTGTAGGATCGTGCCTACAGACTCCGGAGGATGTTGACAAGCTTCGCAGCATTGGAGTAAAAACAATTTTCTGCTTGCAGCAAGATCCAGATTTGGAGTATCCAAATTTCATTTCTTCAAAACTGCTGAATTCCTTCACCGTGTTGGAAAGATATTTTGGGGTTGACATTGGTGCTATAATAGCATATACAAAGACGTTTGATGATATTGAACATTTGCGAGCTCAGATAAGGGATTTTGATGCATTCGACCTACGGCTAAGGTTACCAGCTGTTGTAAGTAAATTGCATAAAGCCATAAAACGAAATGGTGGAGTGGCTTACATACATTGCACTGCTGGACTTGGAAGAGCTCCTGCTGTTGCGATGGCATACATGTTCTGGGTTCAAGGCTATACACTCAATGAGGCTTTAGAATTACTGCTGAGCAAACGCTCATGCTTCCCAAAAATAGATGCTATTAAAAGTGCAACGGCCGATATTCTTTCAGGATTTAAAAACAAGCCTGTCACTTTATCATGGGAGAATGACCAATGCTCAACTGTAGAAGTATCTGGGCTTGATATTGGATGGGGCCAGAGAATTCCATTAAAATTCGACAAGGAACGAGGTGCATGGATTCTCAATAAGGAACTGCCGGAAGGACGATACGAATACAAGTATATTATTGATGGTGTATGGACGTGCAACGAAAACGAGCCGGTCACTCCACCCAACAAAGATGGCCACGTCAATAATTTCATTGAAGTGGTTGAAGATGAGGATCCAGGTAGTGATAGAACCATTCTTCGGGCAAGATTAACCGGAGATGAACCAGAACTCACGACCGAAGAAAGAAGCAAAATAATACAATTTCTTGAAGATTGCCCAGATGAAAATTGA 1197 42.11 MNCLQNLSISSSLPFQSFKCRQRKPEFQLRNLVIRNFADLHRRFTVKAVSGSTSSAEMSGAEVDDAEEKEEKSEIYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVKTIFCLQQDPDLEYPNFISSKLLNSFTVLERYFGVDIGAIIAYTKTFDDIEHLRAQIRDFDAFDLRLRLPAVVSKLHKAIKRNGGVAYIHCTAGLGRAPAVAMAYMFWVQGYTLNEALELLLSKRSCFPKIDAIKSATADILSGFKNKPVTLSWENDQCSTVEVSGLDIGWGQRIPLKFDKERGAWILNKELPEGRYEYKYIIDGVWTCNENEPVTPPNKDGHVNNFIEVVEDEDPGSDRTILRARLTGDEPELTTEERSKIIQFLEDCPDEN 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8569215 8575874 - Carg01925-RA Car04g01476 146901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01476 398 Pfam Glycogen recognition site of AMP-activated protein kinase 274 358 IPR032640 -
Car04g01476 398 Pfam Dual specificity phosphatase, catalytic domain 172 253 IPR000340 GO:0008138|GO:0016311
Car04g01476 398 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 192 250 IPR000387 GO:0016311|GO:0016791
Car04g01476 398 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 272 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01004 Car-Chr4:5767060 Car04g01476 Car-Chr4:8569215 1.21E-34 dispersed
Car04g01476 Car-Chr4:8569215 Car05g01293 Car-Chr5:11911778 2.55E-06 dispersed
Car11g01374 Car-Chr11:11232661 Car04g01476 Car-Chr4:8569215 8.45E-23 transposed
Car18g00844 Car-Chr18:9435129 Car04g01476 Car-Chr4:8569215 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01476 - - csv:101212390 686.411