Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01478 ATGTTGGCAATGGAGAAGGATTTTGATGCTAAGTTGATGATTCAGGGCAACGGTTCTAATGGCGCCAATGTTCCGAGATCCAAGAGCTTTTCCTTTCGTGCTCCTCAGGAGAATTTTACAATCCAGGATTTTGAATTGGGGAAGATATATGGTGTTGGTTCATATTCCAAGGTTGTAAGGGCGAAGAAGAAGGACACAGGAACTGTATATGCATTGAAGATAATGGACAAAAAATTCATCACCAAAGAAAATAAAACTGCTTATGTGAAGTTGGAAAGAATTGTTCTTGATCAGTTGGATCATCCTGGTGTTGTCAGACTATTTTTTACCTTTCAGGATACTTTTTCTTTGTACATGGCATTGGAGTCTTGTGAAGGCGGAGAACTTTTTGATCAGATAACTAGGAAAGGTCGTCTGTCAGAGGAAGAAGCTCGGTTTTATACGGCCGAAGTGGTCGATGCCCTTGAATACATACACAACATGGGATTGATACACCGAGATATCAAGCCTGAAAACTTGCTACTTACTTCTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCGATGGTCGATAGCCGAATTACGGTTCTTCCAAATGCAGCATCGGATGATAAAGCTTGTACATTTGTGGGCACTGCTGCATATGTTCCTCCAGAAGTCCTTAATTCTTCCCCTGCAACTTTTGGAAATGACCTTTGGGCGCTCGGGTGCACCGTGTACCAGATGCTGTCGGGGACTTCTCCTTTTAAGGATGCAAGTGAGTGGCTTATTTTCCAAAAAATTGTAGCACGAGATATAAAATTCCCGAGCTATTTTTCGGAGCAAGCCAGGGATCTCATCGACCACCTATTGGATTTAGATCCGATCAAGAGACCGGGCGCCGGAGCTGAGGGCTATGCATCCCTCAAGAATCATCCCTTCTTTGAGGGGGTGGATTGGAAGAACATAAGAACACAAACCCCTCCCAGGCTTGCTTTAGAAGCTACGACCAATTCAAACGAGACCGACGATGGCTCCGAGTCCTCTTGGAATCCTTCACATCTTGGTGACGGTGCATCGAGACAAAACGATGGGAATGCTGGTTCTGCATCAACTTCCGAAGGATCAAATCATATTACTCGACTTGCATCGATAGACTCCTTCGATTCAAAATGGCAACAATTCCTTGATCCTGGAGAATCTGTTCTTATGATCTCAATGGTGAAAAAAATTCAAAAGCTATCAAGCAAAAAGGTTCAGCTCATCCTCACCAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTTATTGTGAAGGGGAATATCATTTGGTCTGACAATCCAAATGATCTCAACATTCAAGTGACCAGTCCTTCAAATTTCAAGATCTGCACACCAAAAAAGATTGCCTCTTTTGAGGACGCGAAACAGCGAGCATGGCAGTGGAAGAAGGCGATCGAGGGGCTTCAGAATCGGTGA 1470 43.33 MLAMEKDFDAKLMIQGNGSNGANVPRSKSFSFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEEEARFYTAEVVDALEYIHNMGLIHRDIKPENLLLTSDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTVYQMLSGTSPFKDASEWLIFQKIVARDIKFPSYFSEQARDLIDHLLDLDPIKRPGAGAEGYASLKNHPFFEGVDWKNIRTQTPPRLALEATTNSNETDDGSESSWNPSHLGDGASRQNDGNAGSASTSEGSNHITRLASIDSFDSKWQQFLDPGESVLMISMVKKIQKLSSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLNIQVTSPSNFKICTPKKIASFEDAKQRAWQWKKAIEGLQNR 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8586765 8591060 + Carg01923-RA Car04g01478 146903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01478 489 MobiDBLite consensus disorder prediction 331 372 - -
Car04g01478 489 Pfam PH domain 386 488 IPR033931 -
Car04g01478 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Car04g01478 489 Coils Coil 469 489 - -
Car04g01478 489 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01478 489 Pfam Protein kinase domain 46 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01478 Car18g00847 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01478 Car-Chr4:8586765 Car11g00123 Car-Chr11:688792 2.52E-63 dispersed
Car18g00847 Car-Chr18:9459685 Car04g01478 Car-Chr4:8586765 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88809 PF00069 Pkinase 9.30E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01478 K06276 - csv:101212874 912.909