Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01484 ATGTCCGACAAACACACACACCCAGATCTCCGCCAAATTATGGCCAACGAACCCAACTTTCCGGCCACCGCACAAACCCTAGACTCCTTCTTCCACCACCACACTCACCTGACACGTGGCTTCTCTCCACCGCCACCACCCAAGTTCCAGCCTATCCCGCTCGTCCTAACCGATCCCGCTACTTTTCCCAAGGGGCAGCTTCGCTTTGGCTGTTCCGATAACTCCACAACAACTGCAGGCGGCGGTGGCGCCGCATCGTCCGCTCCATTTTCTCGGCGGAATAAGGCCGTGGATGGTGAATGGCGTCCCTATGGAAACGACGCCGTTGGGGTAAGTAATGGAGCTAACAGTAGATGGCCGAGACAGGAAACTCTCACTCTTCTTGAGATCAGATCTCGTCTTGATCCCAAGTTTAAAGAGAGTAATCAGAAAGGTCCTCTTTGGGATCAGGTTTCTAGGATGATGGCGGAGGAATATGGGTACAAAAGAAGCGGGAGAAAATGCAAAGAGAAGTTCGACAATTTATACAAATACTACAAGAAAACAAAGGAAGGTAAATCGGGGAGGCACGACGGGAAGCACTACAGATTCTTCCGGCAACTCGAAGCCATTTACGGGGACTGTAACCACCAATTATCATCCCCCGTTACCGGCGGAGAGAATCACGTAGAAGCGGGGGGAATGAGTCAAAGCTTTTCAATGTCATCTGATTTCGAAACGTCGTCGTCAGGGAACTACCACGACGACGATCTGTCGGCCATAGCGTTTATGATGAATCAGAGGAGGGTGGAGAAAGGGAGAGAAGACGACATGTCGAAAGGGGAGGGTGTAGGGTGGAGAGAGGAGGTAGAGAGAATGGTGGATTCGAAGGTGAGGAGATTAATGGAAGTGCAGGAGAATTGGATGGAGAAGATTATAGCGAGCGTTGAAGATGGAGAAAAGGAGAGAATTGTTAAAGAGGAAGAATGGAGGAAGAAAGAGGTGGCTAGGTTTGACCGTGAAATGCTTGAGTTTTGTGCGAGGGAGAGAGCTTGGGTTCGAACCCGAGAAGCTGCTTTCATGGAGATTATCAACAAATTTTCTGGTAAATAA 1092 49.73 MSDKHTHPDLRQIMANEPNFPATAQTLDSFFHHHTHLTRGFSPPPPPKFQPIPLVLTDPATFPKGQLRFGCSDNSTTTAGGGGAASSAPFSRRNKAVDGEWRPYGNDAVGVSNGANSRWPRQETLTLLEIRSRLDPKFKESNQKGPLWDQVSRMMAEEYGYKRSGRKCKEKFDNLYKYYKKTKEGKSGRHDGKHYRFFRQLEAIYGDCNHQLSSPVTGGENHVEAGGMSQSFSMSSDFETSSSGNYHDDDLSAIAFMMNQRRVEKGREDDMSKGEGVGWREEVERMVDSKVRRLMEVQENWMEKIIASVEDGEKERIVKEEEWRKKEVARFDREMLEFCARERAWVRTREAAFMEIINKFSGK 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8644007 8645814 + Carg01916-RA Car04g01484 146909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01484 363 Pfam Myb/SANT-like DNA-binding domain 117 204 IPR044822 -
Car04g01484 363 Coils Coil 280 300 - -
Car04g01484 363 ProSiteProfiles Myb-like domain profile. 111 176 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01484 Car-Chr4:8644007 Car14g00256 Car-Chr14:1196989 9.12E-84 dispersed
Car06g00199 Car-Chr6:1182338 Car04g01484 Car-Chr4:8644007 3.42E-13 dispersed
Car14g00043 Car-Chr14:258742 Car04g01484 Car-Chr4:8644007 3.26E-14 dispersed
Car18g00853 Car-Chr18:9572117 Car04g01484 Car-Chr4:8644007 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3365 PF13837 Myb_DNA-bind_4 3.00E-19 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01484 - - cmo:103489406 533.872