Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01485 ATGGCTTCCTTATTCTCTTCATCCACTCTGTTCCTCATTGCCTTTTGCCTCTCCGGTTTAATCTTCTTCCTCACCAGAAAACCCAAACCAAACCGTCTCAAACTCCCCCCCGGTCCGCCCGGTTGGCCCCTCGTCGGCAACCTATTCCAAGTCGCCCGGTCCAGAAAACCCTTCTTCGAATACATCGAAGATCAACGCCGAATCTACGGCCCAATTTTTACCCTTAAAATGGGAACGAGAACAATGGTTGTACTGAGCGATTCGAACCTCGTTCACGAGGCTCTAATTAAAAAGGGGGCAGTTTTTGCTGACCGGCCCAGAGAAAATCCTACCCGGACAATATTCAGCAGCAACAAATTTTCCGTCAATGCGGCGGTTTACGGCCCTATATGGCGGTCCCTCCGCCGAAACATGGTGGAGAATATGCTCAGTCCCGGCAAGGTAAAGCAGTTTCGTGGAGTGAGGGAAAAGGCAATGGAAAAATTCATGAAACGGTTACGAGACGAAGCAGAGGCCAATAACGGTGTCGTTTTGGTGTCGAAAAACGCGCGTTTTGCGGTGTTTTGTATTCTGTTAACAATGTGTTTCGGAATCGAAATGGAAGAAGAAGCGGTGGTGAAAATGGACGAGATTCTCAAATCCGTATTGATCACTCTGGAGCCAAGAATCGACGATTATCTCCCGATTTTAACACCGTTTTTTTCGAAAGAAAAAAATGGAGCGAATTTCGTTCGAAAACAGCAAGTTAAATTCGTCGTTGGGTTAATTAATCGGCGGCGGCGAGCGCTGGAAAATCCGGCGTCCGATGGCGCTGCGACGTCGTTTTCATACCTCGACACGCTTTTCGATTTGAAATTCGATTCCAACGGAGGCAGAGCAGCGGCGACAGATGAGGAATTGGTGACACTCTGTTCGGAGTTTTTGAACGGCGGAACCGACACGACGGCGACGGCGATAGAGTGGGGGATGGCGGAATTGATAGAGAATCCGGGAGTTCAGAGGAAGGTTCTAGAAGAAATTAGAGCGACGGTTGGTGAAAAAAAAGTTGAAGAAAATGATTTAGAGAAAATGGTTTATTTACAATCGGTAGTGAAAGAAGTGCTGCGGAAACATCCTCCGACGTTCTTTACTCTGACGCACTCCGTGACGGCGCCGGCGAAACTGGGAGGATACGACATCCCAAAGGACACCAACGTCGAATTCTTCTTACCGGCCATCGGAAAGGATCCGAAGCTGTGGAAGAATCCGGAGAAGTTCGAACCGGAAAGATTTTCCTCCGGCGAGGAAGAAGCCGATATAACCGGCGTCACTGGCGTCAGAATGATGCCGTTCGGCGTAGGGCGGCGGATCTGCCCGGGGTTGGGAATGGGCACCGTCCACATTCACTTAATGCTTGCTAGAATGCTTCAGGAGTTTGAATGGACCGCCTATCCGGCGGCGAACTCCGTCGACTTTTCATGGAAGATGGAGTTCACCGTCGTCATGAAGAATCCTCTTCGGGCTACCATTAAACCAAGGGTTTAA 1524 49.54 MASLFSSSTLFLIAFCLSGLIFFLTRKPKPNRLKLPPGPPGWPLVGNLFQVARSRKPFFEYIEDQRRIYGPIFTLKMGTRTMVVLSDSNLVHEALIKKGAVFADRPRENPTRTIFSSNKFSVNAAVYGPIWRSLRRNMVENMLSPGKVKQFRGVREKAMEKFMKRLRDEAEANNGVVLVSKNARFAVFCILLTMCFGIEMEEEAVVKMDEILKSVLITLEPRIDDYLPILTPFFSKEKNGANFVRKQQVKFVVGLINRRRRALENPASDGAATSFSYLDTLFDLKFDSNGGRAAATDEELVTLCSEFLNGGTDTTATAIEWGMAELIENPGVQRKVLEEIRATVGEKKVEENDLEKMVYLQSVVKEVLRKHPPTFFTLTHSVTAPAKLGGYDIPKDTNVEFFLPAIGKDPKLWKNPEKFEPERFSSGEEEADITGVTGVRMMPFGVGRRICPGLGMGTVHIHLMLARMLQEFEWTAYPAANSVDFSWKMEFTVVMKNPLRATIKPRV 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8648183 8649706 + Carg01915-RA Car04g01485 146910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01485 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Car04g01485 507 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01485 Car-Chr4:8648183 Car20g00801 Car-Chr20:4860995 6.97E-118 dispersed
Car11g01070 Car-Chr11:8272837 Car04g01485 Car-Chr4:8648183 2.49E-06 dispersed
Car15g00441 Car-Chr15:2312241 Car04g01485 Car-Chr4:8648183 0 wgd
Car04g01485 Car-Chr4:8648183 Car04g02439 Car-Chr4:19436430 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01485 K21995 - csv:101217068 817.764