Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01486 ATGGCTGCCCAGAAACAAGCCATCAAAATCCTCATGCTCCCGTGGCTAGCCCACGGTCACATAACCCCATTCTTCGAGCTAGCCAAAAGGCTCGCGAAACACCGAACCATCTTCCAAATTTACGTATGTTCCTCCCTCGTAAACCTCCAAGCCATAGACCCAAACCTCGCCCGAACCCACTCCATTGAACTCGTCGAACTCCACCTCCCATCCCTCCCCGACCTACCCCCTCACATGCACACCACCAAAGGCATCCCCTTGCACCTCGAGCCCACTTTAATGAAGGCCTTCGACATGGCGGCCAAAGATTTCGAGCTACTCTTGGACCGGCTCGAGCCAGACCTTCTCGTTTCCGACTTGTTCCAGCCCTGGGCGGTTCAGGCGGCGGCGGCGAGGAATATTCCCGTGGTTAACTTTGTAGTCACTGGCGTGGCGATTCTCACGCGTTTGGTGCACGCGTTTTGTAACTCCGGTCGGGAATTTCCATTTCCGGAGATCGATTTTAGTGGGCATTGGAGCTCGAAGAGGGGACGGAAGGTTTCTGATGAAGTGGGCCGCGATTGGGCCTTGCGGGTTTTGAAGTGTTTGAGAATGTCTTCCGATGTGGTTTTAGTTAATACTTCCCCCGAATTTGAAGGGAAATATATCGACTTTCTTGCTTCCTCCTTGAACAAAAAGATTCTTCCAATTGCTCCAGTGGTTCCACAAATCAAGCCGAACGGTGAGAAACTCGAAATTCTCAAATGGCTCGACAAGAAGAGCCCAAAATCGACGGTCTACGTTTCGTTTGGAAGCGAGTACTACCTGATGAATCAAGATAGGGAAGAGCTAGCCCACGGTGTAGAGCAAAGCCACGTGAATTTCATATGGGTCATAAGGTTTCCAAAGGGTGAGCGCCTCACAATCGAAGAGGCGTTACCGGAAGGCTATATGAAGCGAGTAGGAGACAGAGGGGTTATCATGGAGGGATGGGCGCCGCAATTGGAAATATTGAACCATTCGAGCATTGGTGCGTTCGTGTGCCATTGCGGGTGGAACTCCGTGGTCGAGAGCATGGTGTTCGGGGTGCCCATCGTGGCACTACCAATGCAACTCGACCAGCCTTGCCACGCCAAGGTGGCTAACTTGGCTGGCGTGTGCGTGGAGGCCGAAAGGGACGATGAAGGGAATGTTAAGAGAGAAGGAGTGGCGAAGGCTATTAAAGAAGTGGTGTCTGAGGAGAGTGGTGAGGCTTTGAGAGGGAAAGCGAGGGAGATTGGTGAGGCTTTGAGGAAGAGGGAAGAAGGGATTGTTGATGAAGTGCCCACCACCTCGACTCTCGAGCACTATTCAGACCACGAGACACGAGTGGAATGGAAGCTGCTTCTCTGGTTGGCTGAGACTGCACCTGAGGTCGACTTGACGAATAAATTGAAGCCTCGGAAAAGAAGTTCCTCGCTTCGCTTCGACACCGTCCCCGCTTCCCACGGGTTCGGCTTTGATTCAAGCAGGATTTTAGCTTTGAGAACTTCGACACTGTTCTTGGAATCGATGGAGCAGTATGAGAAAGTTGAGAAGATTGGAGAAGGAACTTATGGTGTGGTTTACAAAGCACGCGATCGCGTCACAAATGAGACTATTGCTCTGAAGAAGATCCGCTTGGAGCAGGAAGATGAGGGAGTGCCAAGCACAGCCATTCGTGAAATTTCACTGTTGAAGGAAATGCAGCATGGCAACATTGTAAGGTTGCAAGATGTAGTGCACAGTGAGAAGCGCCTGTATCTTGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCATATGGACTCCTCTCCTGAATTTGCAAGGGATCCACGCCAAGTGAAAATGTTTCTTTACCAAATTCTTCGTGGCATTGCATATTGTCATTCACATAGAGTTCTTCATCGAGATCTAAAACCCCAAAATCTACTGATAGATCGTCGTACCAATGCCCTGAAGCTCGCTGACTTTGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGCTGGAGCCATATGGAAACTGGCTAGAGCACCAGAAATATTACTTGGTTCCCGACATTACTCCACCCCTGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAGATGGTTAACCAGCGGCCATTATTCCCTGGAGACTCTGAGATTGATGAACTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGTTACGTGGCCTGGTGTTACATCTTTGCCTGATTTTAAATCTGCTTTCCCCAAGTGGCCTCCAAAGGACTTGGCTTCTGTAGTTCCTAATCTTGAAGCCGCTGGCATTGATCTTCTCTCTAAAATGCTGTGCTTGGATCCCACCAAAAGAGTCACCGCCAGGAGTGCCCTTGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA 2421 49.48 MAAQKQAIKILMLPWLAHGHITPFFELAKRLAKHRTIFQIYVCSSLVNLQAIDPNLARTHSIELVELHLPSLPDLPPHMHTTKGIPLHLEPTLMKAFDMAAKDFELLLDRLEPDLLVSDLFQPWAVQAAAARNIPVVNFVVTGVAILTRLVHAFCNSGREFPFPEIDFSGHWSSKRGRKVSDEVGRDWALRVLKCLRMSSDVVLVNTSPEFEGKYIDFLASSLNKKILPIAPVVPQIKPNGEKLEILKWLDKKSPKSTVYVSFGSEYYLMNQDREELAHGVEQSHVNFIWVIRFPKGERLTIEEALPEGYMKRVGDRGVIMEGWAPQLEILNHSSIGAFVCHCGWNSVVESMVFGVPIVALPMQLDQPCHAKVANLAGVCVEAERDDEGNVKREGVAKAIKEVVSEESGEALRGKAREIGEALRKREEGIVDEVPTTSTLEHYSDHETRVEWKLLLWLAETAPEVDLTNKLKPRKRSSSLRFDTVPASHGFGFDSSRILALRTSTLFLESMEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFARDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEAGAIWKLARAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEVTWPGVTSLPDFKSAFPKWPPKDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8651086 8660668 + Carg01914-RA Car04g01486 146911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01486 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Car04g01486 806 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Car04g01486 806 ProSitePatterns UDP-glycosyltransferases signature. 324 367 IPR035595 -
Car04g01486 806 ProSiteProfiles Protein kinase domain profile. 514 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01486 806 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 254 408 IPR002213 GO:0008194
Car04g01486 806 Pfam Protein kinase domain 514 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01486 Car04g02436 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01486 Car-Chr4:8651086 Car20g00015 Car-Chr20:87818 2.92E-134 dispersed
Car06g01380 Car-Chr6:9918564 Car04g01486 Car-Chr4:8651086 8.53E-60 dispersed
Car01g01609 Car-Chr1:13219060 Car04g01486 Car-Chr4:8651086 2.27E-101 transposed
Car07g01149 Car-Chr7:6937306 Car04g01486 Car-Chr4:8651086 1.02E-110 transposed
Car11g01468 Car-Chr11:11870500 Car04g01486 Car-Chr4:8651086 1.54E-41 transposed
Car18g00857 Car-Chr18:9596081 Car04g01486 Car-Chr4:8651086 0 transposed
Car18g00854 Car-Chr18:9576525 Car04g01486 Car-Chr4:8651086 6.95E-111 wgd
Car04g01486 Car-Chr4:8651086 Car04g02436 Car-Chr4:19418484 3.25E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88810 PF00069 Pkinase 1.90E-73 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01486 K02206 - cpep:111808432 827.394