Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g01517 | ATGAGAATAATCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCGTCTTCTTCCTCCTCCTGCATCGGCTCCGATTCCGGCATTCATAACAACAATCTCGCCGCTCCTCACCGGCCGCAATCTGAGAAAACCACAGCCAAACGACGGAGGAGGAATCAAGATGAAACGAAATGCCAGATTCATAATCATAACGCTAATGGATCCAACAACGCCTCTCCCGCTCGGCGGAGCTCCATTTACAGAGGAGTTACTAGGCACCGATGGACCGGCCGGTTCGAAGCTCATCTCTGGGACAAGAGTTCATGGAATAACATTCAGAACAAAAAGGGTAGGCAAGGAGCCTACGACAACGAGGAAGCCGCAGCTCGAACTTATGACCTTGCTGCCCTCAAATACTGGGGCCCCGGGACCACGCTCAATTTCCCGGTAGAGTCGTACACGAATGAAATGGAAGAAATGCGGAAAGTTTCCAAGGAGGAATATTTGGCGTCGTTACGGCGGCAGAGCAGTGGTTTTTCCAGAGGCGTTTCCAAGTACCGCGGCGTTGCCCGGCACCACCACAACGGCCGGTGGGAGGCTCGGATTGGCCGTGTTTTTGGAAGCAAATATCTCTACTTGGGAACTTACAATACTCAAGAAGAAGCAGCTGCAGCATATGACATGGCTGCCATTGAGTACAGAGGAGCCAATGCAGTCACCAACTTTGACATTAGCAATTACATTGGGAGGTTACAGAATAAATCATCACCAGATGACCCCAATTGCTCCCCTGCTTCTTCCCAGGGCGAAGTAGTACAACAACAACACGACGTGATTCAGCAGCAACAACAACAACAAATTGTATTCTCGGGCCCGCCCGACCTCCAGTTTTCGATCGAGAATAACCCCGCTATGGTTGTCATGGATGAACCTCCAACACAAGACGACCATGATCTCCATTGGTCTTTCTTAGACACGGGATTATTCGTGCACGTCCCTGACCTCCCACTTGAGAAATCGAGCGAGTTAGCTGACTTATACTTCGACGAGATCAGGTTTGAGGACGATATTGGGTTGATGTTCGAAGCAAGCTTAGAGAACAATAAGAACTGCGAAAGTAATAACAACAATGATGATGATGATAATGTTGAGGAGAAGGATGTCAACAACCGTAGTGAGAAAATCAGATTGTTCGCAGCTACTACGACAACTTCACCGTCTTCTTCATCGATAACCACCTCGGTTTCGTGTGAATTTAGGGTTTGA | 1281 | 48.01 | MRIISSSSSSSSSSSSSSSSSSSSSSSSSSSSCIGSDSGIHNNNLAAPHRPQSEKTTAKRRRRNQDETKCQIHNHNANGSNNASPARRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQNKKGRQGAYDNEEAAARTYDLAALKYWGPGTTLNFPVESYTNEMEEMRKVSKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIGRLQNKSSPDDPNCSPASSQGEVVQQQHDVIQQQQQQQIVFSGPPDLQFSIENNPAMVVMDEPPTQDDHDLHWSFLDTGLFVHVPDLPLEKSSELADLYFDEIRFEDDIGLMFEASLENNKNCESNNNNDDDDNVEEKDVNNRSEKIRLFAATTTTSPSSSSITTSVSCEFRV | 426 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 8812436 | 8815459 | - | Carg01883-RA | Car04g01517 | 146942 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g01517 | 426 | MobiDBLite | consensus disorder prediction | 1 | 88 | - | - | |
Car04g01517 | 426 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Car04g01517 | 426 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 33 | - | - | |
Car04g01517 | 426 | MobiDBLite | consensus disorder prediction | 373 | 393 | - | - | |
Car04g01517 | 426 | ProSiteProfiles | AP2/ERF domain profile. | 91 | 154 | IPR001471 | GO:0003700|GO:0006355 | |
Car04g01517 | 426 | Pfam | AP2 domain | 189 | 240 | IPR001471 | GO:0003700|GO:0006355 | |
Car04g01517 | 426 | Pfam | AP2 domain | 91 | 146 | IPR001471 | GO:0003700|GO:0006355 | |
Car04g01517 | 426 | ProSiteProfiles | AP2/ERF domain profile. | 190 | 248 | IPR001471 | GO:0003700|GO:0006355 | |
Car04g01517 | 426 | MobiDBLite | consensus disorder prediction | 71 | 88 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car04g01517 | Car18g00890 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01517 | Car-Chr4:8812436 | Car11g00872 | Car-Chr11:5425205 | 6.03E-95 | dispersed | |
Car06g00748 | Car-Chr6:5168799 | Car04g01517 | Car-Chr4:8812436 | 1.16E-57 | transposed | |
Car18g00890 | Car-Chr18:9784440 | Car04g01517 | Car-Chr4:8812436 | 6.89E-172 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3367 | PF00847 | AP2 | 1.90E-09 | CL0081 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g01517 | - | - | csv:101206349 | 594.349 |