Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01548 ATGGCTTCCAGAGAAGGGCAGCGGCGGCGTCAACATAATCACAATCTGGTGCCTCTTGCTGCTTTGATCAGTCAAGAGGCGAGGAGCGAGAGGTTGGAGAAACCGAGTGTAAGATATGGGAATGCAGCGCAGTCTAGAAAGGGGGAAGATTATTTTCTCATGAAAACTGATTGTCAGCGACTTCCTGGGAATCCTTCATCCACTTTCTCTGTTTTTGCTATATTTGACGGACACAATGGAAATGCTGCAGCAATTTTCACGAGGGAACATTTGTTGAGTCATGTCTTGGGTGCACTTCCCCGTGGCCTCGGGCAGGAGGAGTGGCTTCAAGCTCTACCACGAGCGTTGGTTGCTGGATTTGTGAAGACAGACAAGGAGTTTCAGAGTAGAGGTGAAACTTCTGGAACTACAGCTACGTTTGTGATCATCGATGGATGGACGGTGACAGTAGCGTCGGTTGGAGATTCCCGGTGTATTTTAGATGCTCAGGGTGGTGCTATCGGCCCGCTCCGTTGTTGGCCGGGAGGCTTATGCCTTTCTCGATCCATTGGAGACATGGATGTCGGGGAGTTCATAGTTCCAATTCCGTTCGTGAAACAAGTAAAGGTATTTACACTATTCTCATTTGGAACTTATTTCATTTTGTTAGGAATCACGAATTTAACGTCTCTAATATATCTCTGCTCGTGTTCTAAGTTATCAAACGCTGGTGGGAGGCTAATAATTGCTTCTGATGGCATCTGGGATGCCCTATCATCAGATATGGCTGCAAAGTCCTGCCGTGGACTACCAGCAGAGCTAGCTGCTAGGCAAGTTGTGAAGGAAGCCTTGAGAACAAGAGGCTTGAAAGATGATACAACGTGTATAGTTGTAGACATAGTTCCTCCAGATAATTCATTACAGTCTTCCTCTCCCCAGAAGAAACAAAGCGTACTCAAATCTCTGTTATTCAGGAAAAAGTCTCACAGTTCTAACAAGCTATCCAAGAGCCTGCTGGGAACTGTAGAGTTGAGTGGATCTAAACACGGCACACCCGGACTGTTCTCTTGTGCTGTATGTCAAATAGATCTTGCTCCCAGTGAAGGCATCTCTGTTCATGCTGGTTCCATCTTCTCCACCAGCTCAAAGCCATGGCAAGGGCCTTTCCTTTGCGCCGATTGTCGAAACAAGAAGGACGCCATGGAAGGAAAGCGTCCCAGCGGTGTGAGAGTGGCATAG 1218 47.45 MASREGQRRRQHNHNLVPLAALISQEARSERLEKPSVRYGNAAQSRKGEDYFLMKTDCQRLPGNPSSTFSVFAIFDGHNGNAAAIFTREHLLSHVLGALPRGLGQEEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIIDGWTVTVASVGDSRCILDAQGGAIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPFVKQVKVFTLFSFGTYFILLGITNLTSLIYLCSCSKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIVPPDNSLQSSSPQKKQSVLKSLLFRKKSHSSNKLSKSLLGTVELSGSKHGTPGLFSCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVRVA 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8993847 8997122 + Carg01852-RA Car04g01548 146973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01548 405 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Car04g01548 405 Pfam Protein phosphatase 2C 64 167 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01548 Car18g00925 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01548 Car-Chr4:8993847 Car11g01047 Car-Chr11:7986940 7.24E-143 dispersed
Car18g00925 Car-Chr18:9998470 Car04g01548 Car-Chr4:8993847 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01548 - - cmax:111478734 744.962