Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01603 ATGAGCAGCGGCAGAAGGAGAAAGCTGCATTTTAGCAAGATCTACTCGTTTGCTTGCGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGACCTGGGTTCTCTCGTGTTGTTTTCTGTAATGAACCAAAGTGTTTTGAGGCAGAAATTCGTAGCTACATAGACAATTATGTTAGTACCACCAAGTATACTTTAGCTACTTTCCTGCCTAAGTCATTGTTTGAGCAATTCAGGAGAGTGGCCAATTTCTACTTTTTAGTCACTGGGATCCTTGCTTTTACTCCCCTTGCTCCTTACACCGCTGTCAGCGCCATCGTCCCTCTTATTCTCGTCATCTCGGCGACGATGATCAAAGAAGGGATCGAGGATTGGAGGCGCAAAAAACAGGATCTTGAGGTAAACAATAGAAAGGTAAAAGTGCACCATGGAGATGGAGTTTTTGGTTATACAGAGTGGAAGAATCTGATGGTTGGTGATATTGTGAAAGTAGAGAAGGATGGATTCTTTCCAGCTGATATTGTCTTGCTTTCATCAAGTTATGAGGATGCAATCTGCTACGTTGAGACGATGAATCTCGACGGCGAGACGAATTTGAAACTAAAACAAGCGTTGGATGTAACGTCGCATATGAACGAAGATTTTATGTTCAATAGCTTTAAGGCTATCCTAAAATGTGAGGATCCAAATGCAAATTTATACAGTTTTGTTGGTAGTTTAGAGCTGGAAGAACAACAATATCCTCTGTCTCCTCAACAGCTACTCCTTCGAGGCTCTAAGCTTCGGAATACTGATTATATATACGGGGTCGTTGTCTTTACGGGTCGTGACACGAAGGTTATTCAAAATTCTACTGATCCACCTTCAAAGAGAAGCAAAGTTGAGAGGAAAATGGATAAGATTATATATTTTTTGTTCTGTCTTCTGTTTTTGCTTGCTCTTGTAGGATCTATAGTTTTTGGCGTTGTGACTGAGGATGATTTGGAGAATGGGAGAATGAAACGATGGTATCTGAGGCCTGATGATGCTAGAGTTTTCTATGATCCAAAAAGGGCTCAAATGGCTGCAATTTTCCATTTCCTTACAGCACTGATGTTATATAACTACTTCATTCCAATATCACTGTATGTATCAATAGAAATTGTGAAAGTTCTTCAGAGCATGTTCATCAATCAAGATATTAATATGTATTATGAAGAAGCGAATAAACCAGCTCGTGCTCGCACCTCGAATTTGAATGAAGAACTCGGTCAAGTCGATACGATACTCACTGACAAGACGGGAACTTTGACATGTAATTCAATGGAGTTCATCAAGTGTTCTGTGGCAGGGAGGGCTTATGGTCAGGCAAATGAGGGGAAGCACCATGAGGATGTCAAGAATCAACCTTCACATATCAAAGGTTTTAACTTTAAGGATGATAGGATTATGAATGGGAATTGGGTTAATGAGCCTCATGCCAATGTCATCAAAACTTTTCTTCGTGTTCTTGCGACTTGTCATACGGCGATTCCCGAAATCAATGAGGACAATGGAGAGGTTTCTTATGAGGCCGAATCTCCAGACGAAGCAGCATTTGTGATCGCTGCTAGAGAACTCGGATTCGAGTTCTACAAAAGAACACAGACAAGTATATCACTGCATGAGTTTGATCCTTCATTAGGCAAGAAAGTTGATAGGACATATAAACTGCTGCATGTTTTGGAGTTCAACAGCTCAAGAAAGCGGATGTCTGTCATAGTAAGAAATGAGGAGGCTAAGATATTGTTATTCTGTAAAGGTGCAGACAGTGTTATGTTTGAAAGGCTTGGAAAGAATGGGAGGGTGTTTGAGGAGGAGACCAAGGAACATGTCAGTGAGTATGCTGATGCAGGATTGAGGACTTTGATACTCGCCTACCGCGAGCTCGACGGCGAAGAATACAGAGAGTTTGATAGCAAGTTCACTATGGCGAAAAACTCGGTTAGTGCAGACCGAGAAACGTTGATTAATCAAGTGACCGATAAAATCGAAAGGAATTTGATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTTCAAAATGGGGTTCCTGAGTGCATTGATAGGCTTGCTCAAGCTGGAATAAAGATTTGGGTATTGACTGGGGACAAAATGGAGACTGCTATCAATATTGGTTTTTCCTGTAGATTACTGAGACAAGATATGAAGCAGATTGTAATTACTCTCGAGACGTCGGAAATTCAGGCGTTAGAGAAGACGGCGGATAAGGCATCGATCATCAAGGCATCGAGGCAAAGCGTCCTCGATCAAATTACTCGAGGGAGAGCTCAGATCGCTTCACCAAGTGGGATATCTGAAGCATTTGCATTAATCATTGATGGAAAATCACTTTCTTATGCTTTAGAGGACACCATGAAGGCATTGTTTCTCGAGGTAGCAATACATTGTGCTTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCGCTGGTAACGAGGTTAGTTAAATGTGGAACACAGAAAACAACTTTAGCTATCGGCGACGGTGCCAACGACGTCGGAATGCTTCAAGAAGCAGACATTGGAGTTGGAATTAGCGGTGTTGAAGGAATGCAGGCCGTTATGTCAAGCGACGTTGCGATAGCACAGTTCAAATATCTAGAGCACCTGCTTCTTGTTCATGGACATTGGTGCTATAGAAGGATATCATCAATGATTTGCTACTTTTTCTACAAGAACATTACTTTTGGTTTTACAATATTCTTATACGAAGCATTCACATCATTCTCTGGGCAGCCTGCATATAATGATTGGTTTCTATCGCTTTACAATGTGTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGCGTTTTTGATCAGGATGTCTCTGCAAGACTCTGCCTCCAGTTTCCTCTCTTATACCAACAAGGGGTGCAAAATGTTCTATTCAGCTGGGCCCGAATTCTCAGTTGGATGTTTAATGGACTGTGCAGTGCTGTGATCATTTTCTCCCTATGCACTCGAGCGCTCGAGTATCAGGCGTTCAACTCCGACGGGAGAACTGCAGGGCGGGATATTCTGGGTGCAACGATGTACTCTTGTGTTGTTTGGGTCGTGAACTTGCAAATGGCGCTTGCTGTTAGTTACTTCACCTTGATACAACATCTTTTCATCTGGGGTTCGGTTTCGATCTGGTACATTTTTCTCCTGATCTATGGGTCCATGACCCCCACGTTTTCAACCAATGGTTACAAGATCTTCATTGAAGTCCTTGCCCCTGGCCCTTCCTACTGGCTTGTGCTTCTATTTGTGGTGATCTCAACACTCATTCCTTACTTCTCCTACTCGGCTATACAGATGAGGTTCCTTCCTATGTATCATCAAATGATTTTGTGGATTAGGAATGAAGGGCAGCTGGAAAACCAAGAGTACCGTGATCTTTTGAGGTCAATAGCTCCCGATCAACGAGCATGGGTTCCACCGCACGGTTAG 3480 42.64 MSSGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPKCFEAEIRSYIDNYVSTTKYTLATFLPKSLFEQFRRVANFYFLVTGILAFTPLAPYTAVSAIVPLILVISATMIKEGIEDWRRKKQDLEVNNRKVKVHHGDGVFGYTEWKNLMVGDIVKVEKDGFFPADIVLLSSSYEDAICYVETMNLDGETNLKLKQALDVTSHMNEDFMFNSFKAILKCEDPNANLYSFVGSLELEEQQYPLSPQQLLLRGSKLRNTDYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDKIIYFLFCLLFLLALVGSIVFGVVTEDDLENGRMKRWYLRPDDARVFYDPKRAQMAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSMFINQDINMYYEEANKPARARTSNLNEELGQVDTILTDKTGTLTCNSMEFIKCSVAGRAYGQANEGKHHEDVKNQPSHIKGFNFKDDRIMNGNWVNEPHANVIKTFLRVLATCHTAIPEINEDNGEVSYEAESPDEAAFVIAARELGFEFYKRTQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRNEEAKILLFCKGADSVMFERLGKNGRVFEEETKEHVSEYADAGLRTLILAYRELDGEEYREFDSKFTMAKNSVSADRETLINQVTDKIERNLILLGATAVEDKLQNGVPECIDRLAQAGIKIWVLTGDKMETAINIGFSCRLLRQDMKQIVITLETSEIQALEKTADKASIIKASRQSVLDQITRGRAQIASPSGISEAFALIIDGKSLSYALEDTMKALFLEVAIHCASVICCRSSPKQKALVTRLVKCGTQKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDVAIAQFKYLEHLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFPLLYQQGVQNVLFSWARILSWMFNGLCSAVIIFSLCTRALEYQAFNSDGRTAGRDILGATMYSCVVWVVNLQMALAVSYFTLIQHLFIWGSVSIWYIFLLIYGSMTPTFSTNGYKIFIEVLAPGPSYWLVLLFVVISTLIPYFSYSAIQMRFLPMYHQMILWIRNEGQLENQEYRDLLRSIAPDQRAWVPPHG 1159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9266211 9271497 + Carg01797-RA Car04g01603 147028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01603 1159 Pfam E1-E2 ATPase 137 377 - -
Car04g01603 1159 Pfam Cation transport ATPase (P-type) 500 605 - -
Car04g01603 1159 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Car04g01603 1159 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Car04g01603 1159 Coils Coil 123 143 - -
Car04g01603 1159 Pfam Phospholipid-translocating P-type ATPase C-terminal 870 1120 IPR032630 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01603 Car15g01283 CCT
Car04g01603 Car15g01283 ECH
Car04g01603 Car18g00984 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01603 Car-Chr4:9266211 Car18g00024 Car-Chr18:114729 0 dispersed
Car13g00882 Car-Chr13:9281521 Car04g01603 Car-Chr4:9266211 0 wgd
Car15g01283 Car-Chr15:10038789 Car04g01603 Car-Chr4:9266211 0 wgd
Car18g00984 Car-Chr18:10348396 Car04g01603 Car-Chr4:9266211 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01603 K01530 - csv:101207148 2066.97