Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01604 ATGGCGGCTGTATCACCGGCGCCTAATTCAACTCCGTCGCCGGCTTCTCCCTCCACTCCATCTCCGCCGCAACAATCGCCTCCTCCGAATCCTTCTGACCCAGCAACCCCCACTTCGTCTCCTCCTCCTCCGCCGCCTGGGACCGTTCCGCCGGAAACTCCATCAGCTCCGCCGCCATCAGCACCGGACCCTCCACCATCAGCAACTCCCCCAGTTAGCTCCATTCCTCCAACGCCATCTAATCCCCCACCAAGTTTATCTCCACCTCCTCAAACCCCTCCTCCACAACCATCAAAACCACCTGAAAATTCACCGCCGGTGCCACCACCACCACAAGCTAAACCGCCGGTTAATCCATCACCGCCGCCACAGCCCACAAACCCACCTGAGAAGTCACCTCCTACGCCACCATCAACACCTCCAGTAACGTCACCTCCTTCCCCAGCATCAATACCTCCTACAAACTCACCTCCTCCTCCCGTTGAACCCTCACCTTCAAGTCCTCCTCCCAAGTCATCACCGCCCCCATCTCCCCCACCACCGCCGTTGCGTCTTTCTCCTCCATCACCGTCTAAACCCCCAACATTGCCATCAGGAAATCGCACGGACGATGGTTCTGGTCTTAATGACAGAGTTAACTCGAATTCCAACAGCAATGGAGGAATCAATACAGGGGGTGTGGTCGCAATTGGCGTAGTGGCTGGAATTATAATGCTTTCCATAATTGGGTTTGCAGTATGGTACATGAGGAAGCCAAGGAAAAATGATTCCGGGCATGGGGGCATTATGCCATCCTCTCTCAGCTCCTCTCCTAAGTCGGAATCATCCCTTATGAAGGTCCATTCCACAGTTCATCAAAACATCCATGCCAGTGGCAGTGGCAGTGGCAGTGGCGGCGGCGGTGGCAGTGGTGGAATATACACTCCAAGAGAGCTTGGTGGGTTGGGCAGTTCGAGGCCATTGTTTACATATGAAGAACTCTTCAAAGCAACAAATGCCTTTTCTGCGCAGAACCTTTTGGGAGAAGGCGGCTTTGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGAGGTTGCAGTGAAGGAGCTGAAGATTGGTGGTGGGCAGGGCGAGCAGGAATTCAAAGCTGAAGTTGAGATTATTGGCCGTGTTCACCACCGCCACTTGGTTTCTCTTGTGGGCTATTGCATTTCAGAGCATCAAAGGTTGCTTGTCTATGATTATGTGCCTAATAATTCCCTCTACTACCATCTTCATCTTGAAGGCCATCCTCGAATCATCCACCGTGATATCAAATCTTCGAACATTCTTCTAGACGAAAATTTCGAAGCTCGGGTTTCAGACTTTGGGCTTGCTAAGTTAGCTCTGGACGAACAAACTCATATAACAACCCGTGTTGTGGGAACTTTTGGCTTTCCGGACAATGTTCTCATCTTTCAGGCACGGCCTTTACTAAACCACGCACTCAACAACAGGCAAGACTTCAAAAACTTGGTGGATCCTAGGCTTGAAAGGAACTATATAGAGAGTGAAATGTTGAGGATGATAGGAATAGCTGCTGCTTGCGTGCGCCATGCATCTGCCAAGAGACCACACATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGGCACTGCAGATTTAAGCAATGGAATGAGATTTGGGGAGAGTCAAGCTTTCGACTCGGGTCAACAATCTGCCGAGCTTAGATTTTTCCGAATGCTGGCGTTCGGTAACCAAGATTACAGTTCAGAATTTTATAGCCAAGGTAGCTCAAATGCCTGA 1788 50.5 MAAVSPAPNSTPSPASPSTPSPPQQSPPPNPSDPATPTSSPPPPPPGTVPPETPSAPPPSAPDPPPSATPPVSSIPPTPSNPPPSLSPPPQTPPPQPSKPPENSPPVPPPPQAKPPVNPSPPPQPTNPPEKSPPTPPSTPPVTSPPSPASIPPTNSPPPPVEPSPSSPPPKSSPPPSPPPPPLRLSPPSPSKPPTLPSGNRTDDGSGLNDRVNSNSNSNGGINTGGVVAIGVVAGIIMLSIIGFAVWYMRKPRKNDSGHGGIMPSSLSSSPKSESSLMKVHSTVHQNIHASGSGSGSGGGGGSGGIYTPRELGGLGSSRPLFTYEELFKATNAFSAQNLLGEGGFGSVYKGYLPDGREVAVKELKIGGGQGEQEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVPNNSLYYHLHLEGHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDEQTHITTRVVGTFGFPDNVLIFQARPLLNHALNNRQDFKNLVDPRLERNYIESEMLRMIGIAAACVRHASAKRPHMGQVVRAFDSLGTADLSNGMRFGESQAFDSGQQSAELRFFRMLAFGNQDYSSEFYSQGSSNA 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9273625 9277013 - Carg01796-RA Car04g01604 147029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01604 595 ProSiteProfiles Protein kinase domain profile. 334 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01604 595 MobiDBLite consensus disorder prediction 10 195 - -
Car04g01604 595 Pfam Protein tyrosine and serine/threonine kinase 337 420 IPR001245 GO:0004672|GO:0006468
Car04g01604 595 Pfam Protein tyrosine and serine/threonine kinase 426 461 IPR001245 GO:0004672|GO:0006468
Car04g01604 595 MobiDBLite consensus disorder prediction 255 281 - -
Car04g01604 595 MobiDBLite consensus disorder prediction 1 224 - -
Car04g01604 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Car04g01604 595 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Car04g01604 595 MobiDBLite consensus disorder prediction 261 281 - -
Car04g01604 595 MobiDBLite consensus disorder prediction 196 224 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01604 Car18g00985 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01604 Car-Chr4:9273625 Car15g00207 Car-Chr15:1142382 8.46E-125 dispersed
Car18g00985 Car-Chr18:10354626 Car04g01604 Car-Chr4:9273625 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88815 PF07714 PK_Tyr_Ser-Thr 1.70E-13 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01604 - - csv:101215813 621.313