Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g01604 | ATGGCGGCTGTATCACCGGCGCCTAATTCAACTCCGTCGCCGGCTTCTCCCTCCACTCCATCTCCGCCGCAACAATCGCCTCCTCCGAATCCTTCTGACCCAGCAACCCCCACTTCGTCTCCTCCTCCTCCGCCGCCTGGGACCGTTCCGCCGGAAACTCCATCAGCTCCGCCGCCATCAGCACCGGACCCTCCACCATCAGCAACTCCCCCAGTTAGCTCCATTCCTCCAACGCCATCTAATCCCCCACCAAGTTTATCTCCACCTCCTCAAACCCCTCCTCCACAACCATCAAAACCACCTGAAAATTCACCGCCGGTGCCACCACCACCACAAGCTAAACCGCCGGTTAATCCATCACCGCCGCCACAGCCCACAAACCCACCTGAGAAGTCACCTCCTACGCCACCATCAACACCTCCAGTAACGTCACCTCCTTCCCCAGCATCAATACCTCCTACAAACTCACCTCCTCCTCCCGTTGAACCCTCACCTTCAAGTCCTCCTCCCAAGTCATCACCGCCCCCATCTCCCCCACCACCGCCGTTGCGTCTTTCTCCTCCATCACCGTCTAAACCCCCAACATTGCCATCAGGAAATCGCACGGACGATGGTTCTGGTCTTAATGACAGAGTTAACTCGAATTCCAACAGCAATGGAGGAATCAATACAGGGGGTGTGGTCGCAATTGGCGTAGTGGCTGGAATTATAATGCTTTCCATAATTGGGTTTGCAGTATGGTACATGAGGAAGCCAAGGAAAAATGATTCCGGGCATGGGGGCATTATGCCATCCTCTCTCAGCTCCTCTCCTAAGTCGGAATCATCCCTTATGAAGGTCCATTCCACAGTTCATCAAAACATCCATGCCAGTGGCAGTGGCAGTGGCAGTGGCGGCGGCGGTGGCAGTGGTGGAATATACACTCCAAGAGAGCTTGGTGGGTTGGGCAGTTCGAGGCCATTGTTTACATATGAAGAACTCTTCAAAGCAACAAATGCCTTTTCTGCGCAGAACCTTTTGGGAGAAGGCGGCTTTGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGAGGTTGCAGTGAAGGAGCTGAAGATTGGTGGTGGGCAGGGCGAGCAGGAATTCAAAGCTGAAGTTGAGATTATTGGCCGTGTTCACCACCGCCACTTGGTTTCTCTTGTGGGCTATTGCATTTCAGAGCATCAAAGGTTGCTTGTCTATGATTATGTGCCTAATAATTCCCTCTACTACCATCTTCATCTTGAAGGCCATCCTCGAATCATCCACCGTGATATCAAATCTTCGAACATTCTTCTAGACGAAAATTTCGAAGCTCGGGTTTCAGACTTTGGGCTTGCTAAGTTAGCTCTGGACGAACAAACTCATATAACAACCCGTGTTGTGGGAACTTTTGGCTTTCCGGACAATGTTCTCATCTTTCAGGCACGGCCTTTACTAAACCACGCACTCAACAACAGGCAAGACTTCAAAAACTTGGTGGATCCTAGGCTTGAAAGGAACTATATAGAGAGTGAAATGTTGAGGATGATAGGAATAGCTGCTGCTTGCGTGCGCCATGCATCTGCCAAGAGACCACACATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGGCACTGCAGATTTAAGCAATGGAATGAGATTTGGGGAGAGTCAAGCTTTCGACTCGGGTCAACAATCTGCCGAGCTTAGATTTTTCCGAATGCTGGCGTTCGGTAACCAAGATTACAGTTCAGAATTTTATAGCCAAGGTAGCTCAAATGCCTGA | 1788 | 50.5 | MAAVSPAPNSTPSPASPSTPSPPQQSPPPNPSDPATPTSSPPPPPPGTVPPETPSAPPPSAPDPPPSATPPVSSIPPTPSNPPPSLSPPPQTPPPQPSKPPENSPPVPPPPQAKPPVNPSPPPQPTNPPEKSPPTPPSTPPVTSPPSPASIPPTNSPPPPVEPSPSSPPPKSSPPPSPPPPPLRLSPPSPSKPPTLPSGNRTDDGSGLNDRVNSNSNSNGGINTGGVVAIGVVAGIIMLSIIGFAVWYMRKPRKNDSGHGGIMPSSLSSSPKSESSLMKVHSTVHQNIHASGSGSGSGGGGGSGGIYTPRELGGLGSSRPLFTYEELFKATNAFSAQNLLGEGGFGSVYKGYLPDGREVAVKELKIGGGQGEQEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVPNNSLYYHLHLEGHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDEQTHITTRVVGTFGFPDNVLIFQARPLLNHALNNRQDFKNLVDPRLERNYIESEMLRMIGIAAACVRHASAKRPHMGQVVRAFDSLGTADLSNGMRFGESQAFDSGQQSAELRFFRMLAFGNQDYSSEFYSQGSSNA | 595 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9273625 | 9277013 | - | Carg01796-RA | Car04g01604 | 147029 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g01604 | 595 | ProSiteProfiles | Protein kinase domain profile. | 334 | 595 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car04g01604 | 595 | MobiDBLite | consensus disorder prediction | 10 | 195 | - | - | |
Car04g01604 | 595 | Pfam | Protein tyrosine and serine/threonine kinase | 337 | 420 | IPR001245 | GO:0004672|GO:0006468 | |
Car04g01604 | 595 | Pfam | Protein tyrosine and serine/threonine kinase | 426 | 461 | IPR001245 | GO:0004672|GO:0006468 | |
Car04g01604 | 595 | MobiDBLite | consensus disorder prediction | 255 | 281 | - | - | |
Car04g01604 | 595 | MobiDBLite | consensus disorder prediction | 1 | 224 | - | - | |
Car04g01604 | 595 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 427 | 439 | IPR008271 | GO:0004672|GO:0006468 | |
Car04g01604 | 595 | ProSitePatterns | Protein kinases ATP-binding region signature. | 340 | 362 | IPR017441 | GO:0005524 | |
Car04g01604 | 595 | MobiDBLite | consensus disorder prediction | 261 | 281 | - | - | |
Car04g01604 | 595 | MobiDBLite | consensus disorder prediction | 196 | 224 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car04g01604 | Car18g00985 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01604 | Car-Chr4:9273625 | Car15g00207 | Car-Chr15:1142382 | 8.46E-125 | dispersed | |
Car18g00985 | Car-Chr18:10354626 | Car04g01604 | Car-Chr4:9273625 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88815 | PF07714 | PK_Tyr_Ser-Thr | 1.70E-13 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g01604 | - | - | csv:101215813 | 621.313 |