Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01638 ATGTCCGTATCGATTTCCAACTGCTTCTCTAATTTAATCTGCCAGGAGGATTCCTCCGGCGTCTTGTCCGGCGAGTCGCCGGGGTGTTCTTCCGACTTCGATTCGACGGCCTGCGTTGAGGAATCTATCGCCGTCTTCATCAAGGATGAGCGTCGCTTCGTCCCTGATTATGACTGTTTCTCGCGCTTCCAATCTCCATCGCTGGATGCGGCCGCTAGACTAGACTCTGTTGCATGGATTCTTAAGGTTCAAGCCTATTACGGTTTTCAGCCTTTGACAGCGTATCTCTCCGTCAACTACTTGGATCGCTTCCTTTGTTCACGCCGTTTGCCGCAAACAAATGGGTGGCCATTGCAACTCCTCTCTGTTGCTTGCCTGTCACTGGCTGCTAAAATGGAGGAACCTCTTGTTCCCGCTTTACTAGATCTTCAGGTTGAGGGGGCTAAATATATATTTGAACCCAGAACAATATGCAGGATGGAGTTGTTGGTGCTGAGGGTATTGGATTGGCGGCTGCGTTCAGTAACGCCGTTCAATTTCATAGCATTCTTTGCTTGCAAGCTCGACCCATCGGGAGATTTCATCGGGTTTCTTATTTCAAGAGCAACAGAAATTATAGTATCGAATATCCGAGAGGTAATCTTTCTGGATAACTGGCCATCGTGTATTGCGGCAGCCGCCTTGCTTTGTGCAGCAAATGAAGTCCCGGGTTTGTCTGTTGTCAATCCAGAACATGCTGAATCATGGTGCAGCGGCCTGAGGAAAGAAAATATCACCGGCTGCTACCGGTTAATGCAAGAGGTTGTTCTTGTTAGTAGCCGGAGCAAGTCCCCCAAAATCCTACCCGGCCAGTTTAGAGTGACTGTCCGCACTAGGATGACATCTAGCGACTTATCCTCCTACTCCTCCTCTTCCTCATCTTCGTCATCACCAAACAAAAGGAGAAAATTAAACCAGAGCAGCGTCTGGATAGATGATGACAAAGGTAACACCGAAGAATGA 1002 48.5 MSVSISNCFSNLICQEDSSGVLSGESPGCSSDFDSTACVEESIAVFIKDERRFVPDYDCFSRFQSPSLDAAARLDSVAWILKVQAYYGFQPLTAYLSVNYLDRFLCSRRLPQTNGWPLQLLSVACLSLAAKMEEPLVPALLDLQVEGAKYIFEPRTICRMELLVLRVLDWRLRSVTPFNFIAFFACKLDPSGDFIGFLISRATEIIVSNIREVIFLDNWPSCIAAAALLCAANEVPGLSVVNPEHAESWCSGLRKENITGCYRLMQEVVLVSSRSKSPKILPGQFRVTVRTRMTSSDLSSYSSSSSSSSSPNKRRKLNQSSVWIDDDKGNTEE 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9440369 9443790 - Carg01762-RA Car04g01638 147063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01638 333 MobiDBLite consensus disorder prediction 295 333 - -
Car04g01638 333 Pfam Cyclin, N-terminal domain 43 172 IPR006671 -
Car04g01638 333 MobiDBLite consensus disorder prediction 319 333 - -
Car04g01638 333 MobiDBLite consensus disorder prediction 295 318 - -
Car04g01638 333 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Car04g01638 333 Pfam Cyclin, C-terminal domain 175 276 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01395 Car-Chr1:12164504 Car04g01638 Car-Chr4:9440369 1.90E-40 dispersed
Car04g01638 Car-Chr4:9440369 Car05g00808 Car-Chr5:7675842 3.53E-147 dispersed
Car07g00578 Car-Chr7:2925669 Car04g01638 Car-Chr4:9440369 8.48E-33 dispersed
Car04g00277 Car-Chr4:1565989 Car04g01638 Car-Chr4:9440369 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01638 K18810 - csv:101209417 563.533