Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01690 ATGGATGGTGAAAATGGGATCCGGAGACCTAATTTTCCATTACAATTGTTGGAGAAAAAAGAGGAAGAACACCCATGTTCCACCTCCGCAGACAACGGAACAACAACAACAACCACCACCACCACGACCACGACGGTGAATCCGAATCTTCAATCTTCTTCACCTAAGAAGCCACCTCCCAAAAGGGCTACCACCAAAGATCGTCACACGAAAGTCGATGGTCGTGGTCGGAGGATTCGGATGCCGGCCCTTTGCGCTGCTAGGGTTTTTCAGCTTACTAGAGAGCTTGGTCATAAGTCCGACGGTGAAACTATAGAGTGGCTGTTGCAACAGGCGGAGCCGGCTGTCATCGCCGCCACGGGTACAGGTACCATTCCGGCTAATTTCACCTCGCTTAATATTTCTCTCCGTAGTTCCGGCTCCACCGTTCTTGCTCCTTCTCACCTCCGGACGAGCTATTTCAGTCCGACACAATTCGCCGTCAGAACAAGATCTGATCTTTGGGATAGGAGTAATAATAATAATAATCATAATCATAATAATAATAATAATACTCTGGTGGATGATTCTTCTACATTTTTTAATTTCAATTCTCCCAATTACATCAACGCATTCAAGCACGATCAGGGTGGGATTGATGTAACCGACGCTGGAAAGAAACGGCGGCCGGAGAATTCGGAATCGTCATCGGAGAATCCGGTGGGGAATTATTTGGTTCAATCGAGTACCGGGTCGATTCCGGCGAGTCACAGCACTCCGGTGCCGGCAACATTTTGGATGGTGACGAATCCGAGCAATCAAGCGAGTGATCCGATGTGGACATTTCCGTCGGTGAGTAACAGCAGCATGTTTAGAGGGGGAAGCGGCGGCGGTGGCGGTGGTGGTGGCGGGGGATTTCATTTCATGAATCTTCCACCACCAATGGCTCTTTTGCCAACTGGGCAACAAGTGGGGTCAGGGATCGGGGGTGGTAGCGGTGGTCCGGCGACCGACACCCATTTGGGGATGTTGGCGGCTCTTAGTGCTTATAGGACGATACCGGGTGTGTCAATTTCAGAATCTCCGACAAGAGGAGCGGCGGCTGTTCATCCAGGTGGAAATGAGGCTCATGATTCCACTTCTAATCGTGATCAATCATAG 1140 50.09 MDGENGIRRPNFPLQLLEKKEEEHPCSTSADNGTTTTTTTTTTTTVNPNLQSSSPKKPPPKRATTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVLAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNHNHNNNNNTLVDDSSTFFNFNSPNYINAFKHDQGGIDVTDAGKKRRPENSESSSENPVGNYLVQSSTGSIPASHSTPVPATFWMVTNPSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGGGGFHFMNLPPPMALLPTGQQVGSGIGGGSGGPATDTHLGMLAALSAYRTIPGVSISESPTRGAAAVHPGGNEAHDSTSNRDQS 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9711586 9712725 - Carg01709-RA Car04g01690 147115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01690 379 MobiDBLite consensus disorder prediction 207 249 - -
Car04g01690 379 MobiDBLite consensus disorder prediction 28 59 - -
Car04g01690 379 MobiDBLite consensus disorder prediction 1 73 - -
Car04g01690 379 ProSiteProfiles TCP domain profile. 65 119 IPR017887 -
Car04g01690 379 MobiDBLite consensus disorder prediction 228 249 - -
Car04g01690 379 MobiDBLite consensus disorder prediction 212 227 - -
Car04g01690 379 MobiDBLite consensus disorder prediction 352 379 - -
Car04g01690 379 Pfam TCP family transcription factor 64 183 IPR017887 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01690 Car18g01068 CCT
Car04g01690 Car18g01068 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01690 Car-Chr4:9711586 Car04g01863 Car-Chr4:10791537 3.55E-45 dispersed
Car10g00176 Car-Chr10:839601 Car04g01690 Car-Chr4:9711586 4.24E-94 wgd
Car11g00147 Car-Chr11:831723 Car04g01690 Car-Chr4:9711586 1.48E-80 wgd
Car13g00957 Car-Chr13:9659431 Car04g01690 Car-Chr4:9711586 9.82E-54 wgd
Car18g01068 Car-Chr18:10862749 Car04g01690 Car-Chr4:9711586 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3388 PF03634 TCP 1.20E-37 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01690 - - cmax:111485089 640.188