Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01713 ATGACGAGAGGTTTTAGAAGACGAAATTTGTGTTCAAAGCCCATAGATCGTCTCCGATTCCAGGCATCGGCGGACGGTGCTCCGAAATCGGGATTCCTCAGAGATATGAAGGTGAAGGAGATCTTTACTTATTTGCTTATCGGTCTTCCGTTGGTCGTTTTTGTTGGTTTGGTGTTCAGGAATCCGGCGGCGGATCTGTCATTGGGTTTTGCTGAAGCCAGAGCATTGGAAAGAGTGGTCACTAATGGCAGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTAGACTTTCCAATAGAGACAAGCTTATTGGAGGCCTTCTCATTCCTGGATTTGATGAAGCATCATGCTTGAGTAGATATCAATCCAGTTTATATCGAAGAATTTCGACCCACAGACCATCTCCTTACCTCATCTCGAAGCTTAGAGAGTACGAAGCGCTTCATCGACGCTGTGGTCCGCATACAAAACCATATGATGAAGCAGTAGAGCAGCTCAGATCTGGCAGTAGTGTTAGTTTGACGGAGTGTAAATATGTTGTGTGGATGTCTTATAGTGGCTTGGGAAATAAGATACTCACTTTGGCTTCTGCATTTCTCTATGCCGTTCTTACCGATCGCGTCTTGCTTGTCGATCCGGGGAAGGATATGGCTGATCTATTTTGTGAGCCCTTCCCAGAAAAAACTTGGCTGCTACCAAATGACTTCCCCTTGATGGATCAATTCAGCAACTTTAATCAGAAATCTCCTAATTGTCATGGATATATGCTCAAGACGAACACGCTAAACGAATCGACAGAAGCGCTCCCATCCTATCTATACCTACATTTGGTTCATGATTATGATGATCATGACAAGCTTTTCTTCTGTGATCAAGAACAGGCTCTTTTAAGTAGGGTCCCTTGGCTGATACTCAAGACAGATAACTACTTTGTTCCATCGCTCTTCCTGATCCCGTCTTTTGAGCACGAACTGAGTAACTTATTCCCCCAAAAAGACAACGTGTTTCATCATCTGGGTCGATATCTTTTCCACCCATCGAATCACGTTTGGGGACTGATTACGAGATACTACGACGCATATCTATCAAGTGCAGATGAATTGATAGGAATTCAAGTAAGAGTGTTCGAGATTGGATCGGGACCATTCGAACATATAATGGATCAGATTTTAAGCTGTACTCTTCAGGAGAAGATACTTCCCGACCTAGACAAGGAAGGCTTCTCTTCGGTTCCCTTGGAACGCCCGAGAGTGAAAGCGGTTTTGATGACATCCTTGAGTTCTGGATACTATGAAAAGTTGAGAACCTTGTACTGGGAATACCCAACCATAACGGGAGAGGTCATTGCAGTTCACCAGCCAAGCTACGAAATGTATCAGCAGACTGAGAAGAAGGCTCACAACAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTATGAGCGACGTATTGGTGACCAGTGCATGGTCGACGTTCGGGTACGTGGCTCAAGGACTCGGGGGATCGAAGCCATGGATTCTTTACAAGGCGGAGAACATGAGCACGCCCGATCCAGCGTGTGGTAGGGCGATGTCAATGGAGCCTTGCTTTCATGCTCCTCCGTTCTATGATTGCAAGGCAAAGAAAGGAATAGATACTGGTGTAGTTGTTCCACATGTAAGACATTGTGAAGACATGAGCTGGGGTCTTAAGCTTGTTCACCATCAGGATTTATAA 1716 45.1 MTRGFRRRNLCSKPIDRLRFQASADGAPKSGFLRDMKVKEIFTYLLIGLPLVVFVGLVFRNPAADLSLGFAEARALERVVTNGSSESSGSENGFSRLSNRDKLIGGLLIPGFDEASCLSRYQSSLYRRISTHRPSPYLISKLREYEALHRRCGPHTKPYDEAVEQLRSGSSVSLTECKYVVWMSYSGLGNKILTLASAFLYAVLTDRVLLVDPGKDMADLFCEPFPEKTWLLPNDFPLMDQFSNFNQKSPNCHGYMLKTNTLNESTEALPSYLYLHLVHDYDDHDKLFFCDQEQALLSRVPWLILKTDNYFVPSLFLIPSFEHELSNLFPQKDNVFHHLGRYLFHPSNHVWGLITRYYDAYLSSADELIGIQVRVFEIGSGPFEHIMDQILSCTLQEKILPDLDKEGFSSVPLERPRVKAVLMTSLSSGYYEKLRTLYWEYPTITGEVIAVHQPSYEMYQQTEKKAHNRKAWAEMYLLSMSDVLVTSAWSTFGYVAQGLGGSKPWILYKAENMSTPDPACGRAMSMEPCFHAPPFYDCKAKKGIDTGVVVPHVRHCEDMSWGLKLVHHQDL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9819651 9822153 - Carg14392-RA Car04g01713 147138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01713 571 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00430 Car-Chr16:2685012 Car04g01713 Car-Chr4:9819651 0 transposed
Car01g00737 Car-Chr1:4491587 Car04g01713 Car-Chr4:9819651 0 wgd
Car13g00974 Car-Chr13:9728584 Car04g01713 Car-Chr4:9819651 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01713 K13681 - csv:101216541 1003.43