Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01717 ATGTTGTGCATGTGGCGAAAAGACCGGTATATGGCTCCTGAAGTTTTTAAGCACAGAAAATATGATAAGAAAGTGGACGTGTTTTCTTTTGCGATGATATTATACGAGATGCTGGAGGGAGACCCTCCACTGGCAAATTATGAGCCGTATGAAGCTGCCAAATACGTGGCTGAAGGTCATAGACCGGTGTTCCGTGCGAAAGGATACCTTTCTGTTCTAAGAGAGTTAACTGTAGAATGTTGGGCAGCTGATATGAACAAGAGACCTTCTTTCTTGGAAATTCTCAAAAGACTTGAAAAGATCAAGGAAAGATGTACCTACTGA 324 41.98 MLCMWRKDRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKYVAEGHRPVFRAKGYLSVLRELTVECWAADMNKRPSFLEILKRLEKIKERCTY 107
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9841456 9842840 - Carg14388-RA Car04g01717 147142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01717 107 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01717 107 Pfam Protein tyrosine and serine/threonine kinase 9 98 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01717 Car-Chr4:9841456 Car03g01214 Car-Chr3:9473607 8.62E-26 dispersed
Car18g01039 Car-Chr18:10720494 Car04g01717 Car-Chr4:9841456 3.22E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88819 PF07714 PK_Tyr_Ser-Thr 2.40E-18 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01717 - - csv:101215575 190.66