Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01723 ATGGGTGACGATGAAGAAGAACCGCCACCGTCCTCGCCGCAACCGCCCTCCAAACTTAAGCCCCGTCCCTTGAGGCCCACTATTAATCTGCCGCCACGGACCTCTATGGAGTCGCTCTTCAGCGGTGGCCCCGGTTTGGGATTTGGGTTTAGCCCAGGGCCGATGACCCTCGTCTCCAGCTTCTTCTCCGATCCCGATGACTGCAGGTCTTTTTCTCAGCTCCTCGCCGGAGCCATGACATCGCCGGTGGCTGTTCCTCCGCTGGAATCTGAGTTCAAAGGCCCTCCCGGTCTGCTCGATTCTCCTGGGCTTCTTTCGCCTAGTCAAGGACCTTTTGGAATGACCCATCAGCAGGCTTTGGCTCAGGTTACTATGCAGGCTGCAGAAGCCTATTCTCATAAGCAAATACAAGCAGCATCTTTGTCACCATCAGTAGCACCCTTTGCGTCGTCCTTAGAGCTTTCCACGACCTTTCTGGGTGAGAAGACTAAAGAACAGCCGATGCAACCGCCATTCCCGAACGCTGGAGTTGCATCCAAAGAGGTATTGGATATCTCTCAATCAGAGCAGAGAGTGCAATCTTCTTTGTGTACTGTTGGTAGACCTGCTGATGATGGCTACAATTGGAGAAAATATGGACAGAAACAAGTGAAGGGCGGTGAATTTCCTCGAAGCTACTATAAGTGCACGCACCCGAATTGTCCTGTTAGGAAAAAGGTTGAACGATCTCTTGAAGGACAAGTCACTGAGATTATCTACAAGGGGGAGCACAACCACAAACAACCTCAACCGAACAAGCGGGGAAAGGATGTCGGAAATTCTAACGGATATTCAAGTACTCATGGAAATCCTGAGCTATGTTCTCAAGTTCAGAGTAAATTGAACGAGCTGAAAGATGTGTCTTTCATAAAGAATGATCAAGAATCGAGTCATGTTACGCATGAACAGTTGTCAGGTACTAGTGATGGTGAGGGAGGGAGTGAGATAGAGACTGGAGTGAATCGAAAAGATGACGACGAGCCTGATGCCAAGAGACGGAATACTGAGGTAAGGCTTCCTGAGCCAGCATCTTCTCATAGGACTCTTGCAGAATCCAGAATCATTGTGCAGACTACAAGCGAAGTCGATCTATTGGACGATGGCTACAGGTGGAGAAAGTATGGGCAGAAAATTGTCAAAGGCAACCCTTACCCCAGGAGCTACTATAAATGCACGACACCAGGATGCAATGTTCGTAAACATGTAGAGAGAGCTTCAACGGACCCGAAAGCTGTCATAACGACGTACGAGGGTAAACACAATCATGACGTTCCAGCTGGTAAAATCAGCAGCCACAGGTCAGTCAACAGTAACGTTCCACAGCTAAAATCACATAATATTTCAAATAAGAACAATGATCATGGAAACTCCCGTCATCAGCATGCTGGAGTTCTACGGTTAAAGGAAGAACAAATAACGTAG 1461 48.32 MGDDEEEPPPSSPQPPSKLKPRPLRPTINLPPRTSMESLFSGGPGLGFGFSPGPMTLVSSFFSDPDDCRSFSQLLAGAMTSPVAVPPLESEFKGPPGLLDSPGLLSPSQGPFGMTHQQALAQVTMQAAEAYSHKQIQAASLSPSVAPFASSLELSTTFLGEKTKEQPMQPPFPNAGVASKEVLDISQSEQRVQSSLCTVGRPADDGYNWRKYGQKQVKGGEFPRSYYKCTHPNCPVRKKVERSLEGQVTEIIYKGEHNHKQPQPNKRGKDVGNSNGYSSTHGNPELCSQVQSKLNELKDVSFIKNDQESSHVTHEQLSGTSDGEGGSEIETGVNRKDDDEPDAKRRNTEVRLPEPASSHRTLAESRIIVQTTSEVDLLDDGYRWRKYGQKIVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAGKISSHRSVNSNVPQLKSHNISNKNNDHGNSRHQHAGVLRLKEEQIT 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9876573 9879826 - Carg14382-RA Car04g01723 147148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01723 486 MobiDBLite consensus disorder prediction 1 40 - -
Car04g01723 486 MobiDBLite consensus disorder prediction 457 486 - -
Car04g01723 486 ProSiteProfiles WRKY domain profile. 373 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g01723 486 MobiDBLite consensus disorder prediction 267 285 - -
Car04g01723 486 MobiDBLite consensus disorder prediction 254 285 - -
Car04g01723 486 MobiDBLite consensus disorder prediction 329 353 - -
Car04g01723 486 MobiDBLite consensus disorder prediction 312 327 - -
Car04g01723 486 MobiDBLite consensus disorder prediction 305 361 - -
Car04g01723 486 MobiDBLite consensus disorder prediction 465 486 - -
Car04g01723 486 Pfam WRKY DNA -binding domain 379 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g01723 486 Pfam WRKY DNA -binding domain 204 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g01723 486 ProSiteProfiles WRKY domain profile. 204 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car04g01723 486 MobiDBLite consensus disorder prediction 8 28 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01723 Car-Chr4:9876573 Car16g00952 Car-Chr16:7891861 5.09E-85 dispersed
Car14g00156 Car-Chr14:735118 Car04g01723 Car-Chr4:9876573 1.70E-61 transposed
Car11g00839 Car-Chr11:5035303 Car04g01723 Car-Chr4:9876573 1.18E-14 wgd
Car15g00249 Car-Chr15:1369138 Car04g01723 Car-Chr4:9876573 5.78E-149 wgd
Car18g01035 Car-Chr18:10686288 Car04g01723 Car-Chr4:9876573 0 wgd
Car04g01723 Car-Chr4:9876573 Car04g02685 Car-Chr4:20835857 1.60E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3395 PF03106 WRKY 8.30E-26 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01723 - - cmo:103489160 750.355