Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01724 ATGGAGAAGGCCTTGACCAGAGTGACCAGCTTAAAGGTCGGGAGCTTGTGGATTTCAAAGAAAGCCAAGGAGGAACTCGCTAATATCACCGACGATTTCCAAACTTTCTCAAATACCGTGGAAGAGAAGGCAAAGTGGATTTTCAACAAGCTAAAAGGAAAGCCATTGAAGAGCCTGCCGGAATTACTCCGTGAGTACAACTTACCGCCCGGCCTCTTTCCTCAGAACATAATCAGCTACGAATTTGATGAATCCAGGTCCAGGCTGATTGTGTACTTACCATCCGTTTGTGAGATAAGCTTCAAGGATTCTTCTGTGGTCAGATACGCAACACGGGTGAAAGGAACTCTTCAGAGAGGGAAGCTAACAAGCATTGAAGGAATGAAGACAAAAGTCCTAGTGTGGGTGAAAGTGACAAGCGTGATGGTTGAGGGCTACAAATCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGACCGAAAGATGCGTACGATAAGCCCCGTGACGCCTCAGTAGTTCTCTCGGGTAAAGAGAGTGAAAGCGCGGGAGAACGAAACAGGGAAAGGAACTCGAAAATGGCGATGCCTGGTTATCCAAGGGCTTTTGCAACACTAGGTTCTTGTTATCCACGGCATTCTCCGATCTCCCTTCATCCTCTTGAGGTTGACCTCTCTGGTTTTGTTCATAGAAGATCTGGAAATAAAGGAATCAAGCCAAAATGGCGCACCATGGCACATGAAAATGATACCATACATAGTATCTCCCAGCAAGATGTTGAGAGCTCAGCAGATTATGAACGATCACCAAGATCCTTAAGCCAAGAAAGCCTTATCCTCAGTTCCATGAAGATGAACTTCTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCATCATCAACATCCAAATCGAACTCTAATGCTATGATTGCCAAGCAGCGGTTAAAGATGATTCTGTTGTCCGATCGATGTGCAGTTAATGATGAAACTAAACAAAAAATTGTGGACAGCATGTTGAGTTCTCTTTCGGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTCAGATCTCAGAACGATTTACTCTGTAACGGTGCCCGTGCGAAGGGTGAAGGCTGATTATCAAGGCAGTGAGGAAATTGGAGCAACCATAAATACAGAATTGAAGGATGATGGAGAGAGATCTGGCTCTGCAGGTCCCATTTTCGACTCATTAATTGCAGAAGGAAAAGAGTATTTGCTGTTCTTCGGACCATTAGCTATTTCATTTTCAACAGGAGCCATGTCTGACGAGGAGCACCACTTCGAGTCGAAGGCCGACGCCGGAGCTTCCAAGACTTATCCTCAGCAGGCTGGAACCATCCGCAAGAATGGTTACATTGTCATCAAGGGCAGGCCTTGCAAGGTTGTTGAAGTTTCAACCTCGAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGCCATTGACATTTTCACCTCTAAAAAGCTTGAAGATATCGTTCCTTCTTCTCACAACTGTGATGTTCCCCATGTCAGTCGCACTGATTATCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACGGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAAACGATGAGAGTCTGATGACCCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATCGGCCCAAAATAG 1791 44.84 MEKALTRVTSLKVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLPELLREYNLPPGLFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDASVVLSGKESESAGERNRERNSKMAMPGYPRAFATLGSCYPRHSPISLHPLEVDLSGFVHRRSGNKGIKPKWRTMAHENDTIHSISQQDVESSADYERSPRSLSQESLILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVTVPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGPLAISFSTGAMSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPNDESLMTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 596
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 9880848 9888298 - Carg14381-RA Car04g01724 147149
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car04g01724 596 Pfam Protein of unknown function, DUF538 61 166 IPR007493 -
Car04g01724 596 MobiDBLite consensus disorder prediction 161 175 - -
Car04g01724 596 Pfam Septum formation topological specificity factor MinE 312 378 IPR005527 GO:0032955|GO:0051301
Car04g01724 596 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 487 494 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Car04g01724 596 MobiDBLite consensus disorder prediction 161 195 - -
Car04g01724 596 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 522 591 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car04g01724 Car18g01033 CCT
Car04g01724 Car18g01033 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01279 Car-Chr1:11589971 Car04g01724 Car-Chr4:9880848 8.42E-107 dispersed
Car02g00855 Car-Chr2:6161130 Car04g01724 Car-Chr4:9880848 9.55E-105 dispersed
Car03g00291 Car-Chr3:4021695 Car04g01724 Car-Chr4:9880848 5.24E-50 dispersed
Car04g01724 Car-Chr4:9880848 Car09g00361 Car-Chr9:1964282 3.13E-106 dispersed
Car18g01034 Car-Chr18:10675800 Car04g01724 Car-Chr4:9880848 1.39E-106 transposed
Car18g01033 Car-Chr18:10672726 Car04g01724 Car-Chr4:9880848 6.28E-110 wgd
Car04g01724 Car-Chr4:9880848 Car05g00799 Car-Chr5:7159743 2.56E-63 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01724 K03263 K02180 csv:101222451 353.214