Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g01724 | ATGGAGAAGGCCTTGACCAGAGTGACCAGCTTAAAGGTCGGGAGCTTGTGGATTTCAAAGAAAGCCAAGGAGGAACTCGCTAATATCACCGACGATTTCCAAACTTTCTCAAATACCGTGGAAGAGAAGGCAAAGTGGATTTTCAACAAGCTAAAAGGAAAGCCATTGAAGAGCCTGCCGGAATTACTCCGTGAGTACAACTTACCGCCCGGCCTCTTTCCTCAGAACATAATCAGCTACGAATTTGATGAATCCAGGTCCAGGCTGATTGTGTACTTACCATCCGTTTGTGAGATAAGCTTCAAGGATTCTTCTGTGGTCAGATACGCAACACGGGTGAAAGGAACTCTTCAGAGAGGGAAGCTAACAAGCATTGAAGGAATGAAGACAAAAGTCCTAGTGTGGGTGAAAGTGACAAGCGTGATGGTTGAGGGCTACAAATCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGACCGAAAGATGCGTACGATAAGCCCCGTGACGCCTCAGTAGTTCTCTCGGGTAAAGAGAGTGAAAGCGCGGGAGAACGAAACAGGGAAAGGAACTCGAAAATGGCGATGCCTGGTTATCCAAGGGCTTTTGCAACACTAGGTTCTTGTTATCCACGGCATTCTCCGATCTCCCTTCATCCTCTTGAGGTTGACCTCTCTGGTTTTGTTCATAGAAGATCTGGAAATAAAGGAATCAAGCCAAAATGGCGCACCATGGCACATGAAAATGATACCATACATAGTATCTCCCAGCAAGATGTTGAGAGCTCAGCAGATTATGAACGATCACCAAGATCCTTAAGCCAAGAAAGCCTTATCCTCAGTTCCATGAAGATGAACTTCTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCATCATCAACATCCAAATCGAACTCTAATGCTATGATTGCCAAGCAGCGGTTAAAGATGATTCTGTTGTCCGATCGATGTGCAGTTAATGATGAAACTAAACAAAAAATTGTGGACAGCATGTTGAGTTCTCTTTCGGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTCAGATCTCAGAACGATTTACTCTGTAACGGTGCCCGTGCGAAGGGTGAAGGCTGATTATCAAGGCAGTGAGGAAATTGGAGCAACCATAAATACAGAATTGAAGGATGATGGAGAGAGATCTGGCTCTGCAGGTCCCATTTTCGACTCATTAATTGCAGAAGGAAAAGAGTATTTGCTGTTCTTCGGACCATTAGCTATTTCATTTTCAACAGGAGCCATGTCTGACGAGGAGCACCACTTCGAGTCGAAGGCCGACGCCGGAGCTTCCAAGACTTATCCTCAGCAGGCTGGAACCATCCGCAAGAATGGTTACATTGTCATCAAGGGCAGGCCTTGCAAGGTTGTTGAAGTTTCAACCTCGAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGCCATTGACATTTTCACCTCTAAAAAGCTTGAAGATATCGTTCCTTCTTCTCACAACTGTGATGTTCCCCATGTCAGTCGCACTGATTATCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACGGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAAACGATGAGAGTCTGATGACCCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATCGGCCCAAAATAG | 1791 | 44.84 | MEKALTRVTSLKVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLPELLREYNLPPGLFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDASVVLSGKESESAGERNRERNSKMAMPGYPRAFATLGSCYPRHSPISLHPLEVDLSGFVHRRSGNKGIKPKWRTMAHENDTIHSISQQDVESSADYERSPRSLSQESLILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVTVPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGPLAISFSTGAMSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPNDESLMTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK | 596 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9880848 | 9888298 | - | Carg14381-RA | Car04g01724 | 147149 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g01724 | 596 | Pfam | Protein of unknown function, DUF538 | 61 | 166 | IPR007493 | - | |
Car04g01724 | 596 | MobiDBLite | consensus disorder prediction | 161 | 175 | - | - | |
Car04g01724 | 596 | Pfam | Septum formation topological specificity factor MinE | 312 | 378 | IPR005527 | GO:0032955|GO:0051301 | |
Car04g01724 | 596 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 487 | 494 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Car04g01724 | 596 | MobiDBLite | consensus disorder prediction | 161 | 195 | - | - | |
Car04g01724 | 596 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 522 | 591 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car04g01724 | Car18g01033 | CCT | |
Car04g01724 | Car18g01033 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g01279 | Car-Chr1:11589971 | Car04g01724 | Car-Chr4:9880848 | 8.42E-107 | dispersed | |
Car02g00855 | Car-Chr2:6161130 | Car04g01724 | Car-Chr4:9880848 | 9.55E-105 | dispersed | |
Car03g00291 | Car-Chr3:4021695 | Car04g01724 | Car-Chr4:9880848 | 5.24E-50 | dispersed | |
Car04g01724 | Car-Chr4:9880848 | Car09g00361 | Car-Chr9:1964282 | 3.13E-106 | dispersed | |
Car18g01034 | Car-Chr18:10675800 | Car04g01724 | Car-Chr4:9880848 | 1.39E-106 | transposed | |
Car18g01033 | Car-Chr18:10672726 | Car04g01724 | Car-Chr4:9880848 | 6.28E-110 | wgd | |
Car04g01724 | Car-Chr4:9880848 | Car05g00799 | Car-Chr5:7159743 | 2.56E-63 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g01724 | K03263 | K02180 | csv:101222451 | 353.214 |