Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01725 ATGGGAACAAAGGTGCAGTATGAACGTTATTTGCCAGGATATCACTCAATGAGGGATCTAAATGAAGATTCTCATGGTTGTAGCTGGCCTTTATATTACAGTGAAAAATCGTGTCAGAGCAGCCCGTATTATAATGGAATTTTGCCAAGTGCTACCTCCGATGCATATCTAGGTTGTGATAGAGATGCTGTGAAGAGGACAATGCTTCAGCACGAAGCCATATTCAAGAATCAAGTTTGCGAGCTGCATCGGTTATATATAAAACAGAGAGAGTTAATGAATGATATTAAAAGATCCGAACACAGACACCCGATGCCGGTAGACATATCATTCTCATCTAGTCCTCTAGCATCTCAAAGTACTCCTGATGGTGCAAGAAAATGGCATCTCCCAAGCTTTCCTCATGCCATTTCTTCTAGTGGTGGACCGTATGCACCTAGTGTTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAAAGAATAATAGAAGCGATGGTCTCTTCCTATCCCAAAATGGAACGAGTTCAAAAGACTGTGAGGTACTAGAATCTAAACCCTCAAAGGTTAGGAGGAAAACATTTGATCTTCAACTTCCAGCAGACGAGTACATTGATAGCGAAGAGGGGGAGGTATTTCATGATGAAAAAGTGCCTCCCATGTTGGGTTTCCATTCAAACGGTAACAAGAAATTTGAGATTCAGGGTTGTGTGACGGCAAATCCTGGTGGAAAAAGTGATGTTAAAGGTGCTGCTTTGAGATCTGACTCGTGTTTATGGAACAGATATGGTTTGGCCGATTTAAACGAGCCCATTCAGGTTGAAGAGGCAAATGGGTCCAATTTTTTTGATCTTCCTAATGCTCGTGGCTCCAGCAATTGGGAGGCTCAAGGCCCCATTGTATCATCTAGGAAGCAAGAAATGTTTCTGAGCTCCAGTAATGAAGGTGGACATGCAACAAATAGAAGAGCGGCATTCCCTAACATCTTTGAAGCAGGTAATATCTCTTCTTTATATTGCATTAGCATTCTTAAAACTTTCATGCAAGGATTTTCGGCTTTCGCAGTTCCCCAAACTGTCTTTAGTCAGTCATGTTTAATGCTTGGAGTATATGAACGGATTGGACGTAGTAAGGAAAGCGAGAAACCCGTTACTCGTGGTCAGATGGAAAATTTTCATGTATCTTCTAATCCTATGCAAGTTCCACTAAACAAGTTTCATGAACCTCCAGTTTTCTATGTCAATGATAGAAGCAAGGTCCAACAGGAGTTGGACAGGCCAGTTAGTGATTTGCAATTATCCAAAAGAAGTTATGAAATGTCTAATACTGGGGATCCTGGTTATCTTTTAGCTTCGCAGACATCTCGTACATATCCTATCGCTCCTTCTTTGGACGTGGGTAAGTCTTGGGCTCACTCTGGTTCATCTTGGGAAAAGCCAAATGGCAACAGCTCCCAGAAGTCGACATCAGGTCATACACAACCGTGTTTCAAATTGTCTGCTGCTGTGCACAAGAGTTTTCCTTCATCAGCCCAGAACAATAGAATTTTTGGAGATAGATGGCATTTGAGTAGTGACTCTAGATCAAACCCTGGGTCTGGTTGTGATACTCCTTACCAGAATGGACTCTATCTCGGGTCTACGTCTGGCTCCAACGGAGGAGTTCTCGCCTCTACCGTAAGGCACGACCATGCTGCAAACTATTACAAGGGCTCTGGTTGTGTGGGCACGAATTCTCCGAAAGACATTAACTTGAATGTAATGCTCTCAAACAGTTTATCTAATGAGGCAGGTCAACAACCAAACTACCGGACCAGAGAGGCAGAACCAAACAATGAGGACCATCATAATGTATTACCATGGTCAAGGGCTGTACCTGCTAGTAAGAATGAAACGATCAATTCAAGCAGATTATCAATGACTGCAGAGCTTAATTTTGGGCTCTCTCCAAAGAACCAGTTTTCCAAAAGAAACGAAGCTGAACATGGCGGTAAAGTTGAATGTTGTCCGAACATTGAGTCTAATTCACGTTGTAGTAACATTGAGCCCAGAACGTCAGAACACGGTGAATGTCGGAGTAACAGAAAACTTCTTGGGTTTCCCTTTTTTGAAGGGCCATGCATTTCTAAGAATGAGTCATTTTCTGTTACATCCCCATCGGCACCTCTTCCTAATCCATCTGAGAATGAAGTGGACGATAAACGGAAAACTAGAGTACTTGATATCAATTTGCCTTGTGATCCTGTTTTTGATTCGGATAATGCTACTACCGGAGCTCTGGCTGTCGAGAATAGAAAGGACACAAAGATCTCTACTGTTAGAGTTCATATTGATTTGAACTCATGTGTCAGTGATGAAGAAGCTTCTATGAGACCTCTACCCTTGGCTTCTTCAAGTGCCAAGGAAAAGGTCATGGTAGAGATAGATTTAGAAGCCCCGGCACTGCCCGAGACTGAAGACGACATAATTGCAGAGGAAGAATCTGTAGAAAAACATCACGAACGGCGATCACAATCTCCTCAGCATATGGCTGTTGATATACAGGATGATCTTATGGCTGTAGCAGCAGAAGCAATAGTTGTCATCTCTTCTTGTGGTCATTCCTGTCATTTGGATGATACTGTTAGCAACGCGTTGGAAGATTCTTCAAGCGACCCCCTAAATTGGTTTGCCGAGGTAGTTTCCACACACGGAGATGATAAGCACACCAAGTCTGACAGTGTATTTAGAGACAAAGAAGGCAAGGATAATGGTGAATCCTCTTTGAAAGGGATTGATTACTTCGAATACATGACTTTGAGGCTGGCGGAGGTCGGTGAAGAAGACTACATCCCGAAGCCCTTGGTCCCAGAAAATATGGAAATTGAAGAATCTGGAACCAATTTGTTGCAAAATCGATCCCGAAAGGGCCAGACGAGGAGAGGTAGGCAGCGAAGGGACTTCCAGAAGGATATCCTTCCAGGTCTTTCTTCTCTATCAAGGCATGAGGTTACAGAAGATCTTCAGACATTTGGTGGCCTAATGCGAGCAACAGGCCACTCCTGGCATTCGGGAGTGACGAGGAGGAACTCTACTAGAAACGGTTGCGGTAGGGGAAGACGACGATCAGCGATCAGTCCCCCACCAGCTGTGCATTCAGAATGTAATCAGCCGATACAGCAACTAAGTAACATTGAAATGGTTCTGGAGGATGGAAGCCTGAGTGGTTGGGGCAAGACAACTAGACGGCCCCGTCGACAGAGATGCCCGGCTGGAACGCTCCGCCTGTCCCTTTAA 3273 43.75 MGTKVQYERYLPGYHSMRDLNEDSHGCSWPLYYSEKSCQSSPYYNGILPSATSDAYLGCDRDAVKRTMLQHEAIFKNQVCELHRLYIKQRELMNDIKRSEHRHPMPVDISFSSSPLASQSTPDGARKWHLPSFPHAISSSGGPYAPSVEDVKSSLSSLKKNNRSDGLFLSQNGTSSKDCEVLESKPSKVRRKTFDLQLPADEYIDSEEGEVFHDEKVPPMLGFHSNGNKKFEIQGCVTANPGGKSDVKGAALRSDSCLWNRYGLADLNEPIQVEEANGSNFFDLPNARGSSNWEAQGPIVSSRKQEMFLSSSNEGGHATNRRAAFPNIFEAGNISSLYCISILKTFMQGFSAFAVPQTVFSQSCLMLGVYERIGRSKESEKPVTRGQMENFHVSSNPMQVPLNKFHEPPVFYVNDRSKVQQELDRPVSDLQLSKRSYEMSNTGDPGYLLASQTSRTYPIAPSLDVGKSWAHSGSSWEKPNGNSSQKSTSGHTQPCFKLSAAVHKSFPSSAQNNRIFGDRWHLSSDSRSNPGSGCDTPYQNGLYLGSTSGSNGGVLASTVRHDHAANYYKGSGCVGTNSPKDINLNVMLSNSLSNEAGQQPNYRTREAEPNNEDHHNVLPWSRAVPASKNETINSSRLSMTAELNFGLSPKNQFSKRNEAEHGGKVECCPNIESNSRCSNIEPRTSEHGECRSNRKLLGFPFFEGPCISKNESFSVTSPSAPLPNPSENEVDDKRKTRVLDINLPCDPVFDSDNATTGALAVENRKDTKISTVRVHIDLNSCVSDEEASMRPLPLASSSAKEKVMVEIDLEAPALPETEDDIIAEEESVEKHHERRSQSPQHMAVDIQDDLMAVAAEAIVVISSCGHSCHLDDTVSNALEDSSSDPLNWFAEVVSTHGDDKHTKSDSVFRDKEGKDNGESSLKGIDYFEYMTLRLAEVGEEDYIPKPLVPENMEIEESGTNLLQNRSRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHSGVTRRNSTRNGCGRGRRRSAISPPPAVHSECNQPIQQLSNIEMVLEDGSLSGWGKTTRRPRRQRCPAGTLRLSL 1090
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9893722 9899628 + Carg14380-RA Car04g01725 147150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01725 1090 MobiDBLite consensus disorder prediction 473 492 - -
Car04g01725 1090 MobiDBLite consensus disorder prediction 897 916 - -
Car04g01725 1090 MobiDBLite consensus disorder prediction 1013 1044 - -
Car04g01725 1090 Pfam Plant protein of unknown function (DUF863) 374 1082 IPR008581 -
Car04g01725 1090 Pfam Plant protein of unknown function (DUF863) 147 314 IPR008581 -
Car04g01725 1090 MobiDBLite consensus disorder prediction 1068 1090 - -
Car04g01725 1090 MobiDBLite consensus disorder prediction 956 977 - -
Car04g01725 1090 MobiDBLite consensus disorder prediction 468 492 - -
Car04g01725 1090 MobiDBLite consensus disorder prediction 594 616 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01725 Car18g01032 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01725 Car-Chr4:9893722 Car05g00381 Car-Chr5:2187178 9.09E-57 dispersed
Car11g00343 Car-Chr11:1880439 Car04g01725 Car-Chr4:9893722 1.89E-06 transposed
Car01g00748 Car-Chr1:4540327 Car04g01725 Car-Chr4:9893722 1.39E-12 wgd
Car13g00927 Car-Chr13:9521766 Car04g01725 Car-Chr4:9893722 2.57E-18 wgd
Car18g01032 Car-Chr18:10660439 Car04g01725 Car-Chr4:9893722 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01725 - - bhj:120080916 1740.32