Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01734 ATGTCGTCCGCCGAGAAGGAAAGAGAAACGCAGGTCTACATGGCCAAGCTTTCTGAACAGGCTGAACGCTACGACGAAATGGTGGAGTGTATGAAACAAGTTGCTAAACTAGATGTTGAGCTAACCATGGAAGAGAGAAACTTGCTTTCTGTTGGATACAAAAATGTTATAGGTGCTCGGCGAGCTTCTTGGCGCATCATGTCCTCAATTGAACAGAAGGAGGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAAGGTTACCGTCAGAAGGTGGAGGAGGAGCTTTCCAAGATCTGCACCGATATTCTGACTATTATTGACAACCATCTCATTCCTTCTTCAACTTCTTCAGAAGCATCGACTGCATCGAGCACCGCAAATACTGAACTCCCGTCAACCCACCCAATCCGTCTTGGGCTTGCTCTCAACTTTTCTGTCTTCTACTATGAGATTATGAACTCCCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGATAGTACCCTCATAATGCAGTTGCTGAGAGACAACCTTACTCTCTGGACATCTGATTTACCAGAAGATGGAGCAGCAGTAATGGAGAATGAAGTAGCCCTCACGCAACGACTGGATTGGACATCCATCACCTTTACTCACTATGGAGTATGGACCCGTACAATGGTGGCTTGTGCTGATATTAGCTACTTTTTGGTTCCAACCAAAAACCAGAAAGATCAATTAGATCCATTTATTGAATCTTTGTTTCCCCATTCTTGTTTCACGGCATTAGGCTGA 831 43.92 MSSAEKERETQVYMAKLSEQAERYDEMVECMKQVAKLDVELTMEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKGYRQKVEEELSKICTDILTIIDNHLIPSSTSSEASTASSTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGAAVMENEVALTQRLDWTSITFTHYGVWTRTMVACADISYFLVPTKNQKDQLDPFIESLFPHSCFTALG 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9931031 9933883 + Carg14371-RA Car04g01734 147159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01734 276 ProSitePatterns 14-3-3 proteins signature 2. 183 202 IPR023409 -
Car04g01734 276 Coils Coil 14 34 - -
Car04g01734 276 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Car04g01734 276 Coils Coil 161 181 - -
Car04g01734 276 Pfam 14-3-3 protein 123 201 IPR023410 -
Car04g01734 276 Pfam 14-3-3 protein 14 121 IPR023410 -
Car04g01734 276 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Car04g01734 276 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01734 Car-Chr4:9931031 Car11g01576 Car-Chr11:12512982 5.92E-116 dispersed
Car04g01734 Car-Chr4:9931031 Car12g00098 Car-Chr12:528217 1.00E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01734 - K06630 csv:101221275 348.206