Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g01745 | ATGAAGATGATGGGCCAACACTGTTTCATGAGGAGCACGTTCAGCAATAAGCCCCCACACACCCAAAAGGAATTAAAGAAGAAAAAAAGGAAACCAAACCAACTGAAATCATTACAAAGCAAACAAGGAAAGATAAAAGAAACTAAACTATGTGATTCACAATCACAATGTCTCTTTACCGACACAAAGAACTCTGTTCAATCTCAGTCAAATTCCAACGAAAACTCCCGACCCTTTCGTTTTTCTTCTGTTTTTCCTTGTTTTGAAGGAAATCCAACTCCAGAAATGGGGAAAACTGGAACCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAATTGGACTCTGTTTCTGTGAAAACCGGACCGAAGAAGGCTGATGATTGTGTAGAGGGTGGTGAGGTTGGAGCTAAGCCAGGGCTGGGAAATGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCAATGGGCTCTGTCTCACACTGTGCAGAATCAAGACAAGATTGTTCTACTTCATGTTATCAAGCCTTCAAGAAAGGGGGAAGGACTAAGCAAGGAGACATCACCAAGAGCATATGAATTGGTTCATTCCATGAGAAATTTATGTCAATTGAAGAGACCAGAGGTGGAAGTCGAAGTTGCAGTGGTGGAAGGAGGGAAAGAGAAAGGGTCGGTGATTGTGGAAGAAGCGAGAAAGCAAGAGGCATCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCCACGACATGGCGGCTTCTGATGGTGTGGGCTGGACACCGGTGGGGCGGCGGCGGCGGTGGCGGTGGCGGTGGAGCAGTGGAGTATTGCATACAGAATGCGAGCTGTATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGTGGGTATTTGATCACGACAAAGCGACAAAAGGATTTCTGGCTTTTGGCTTAA | 981 | 46.38 | MKMMGQHCFMRSTFSNKPPHTQKELKKKKRKPNQLKSLQSKQGKIKETKLCDSQSQCLFTDTKNSVQSQSNSNENSRPFRFSSVFPCFEGNPTPEMGKTGTKLPSFCLNRIRPHVRVPIQSKLDSVSVKTGPKKADDCVEGGEVGAKPGLGNGRKIMIVVDSTIEAEGALQWALSHTVQNQDKIVLLHVIKPSRKGEGLSKETSPRAYELVHSMRNLCQLKRPEVEVEVAVVEGGKEKGSVIVEEARKQEASLLVLGQKKRSTTWRLLMVWAGHRWGGGGGGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 326 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 10002835 | 10004073 | + | Carg14360-RA | Car04g01745 | 147170 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g01745 | 326 | Pfam | Universal stress protein family | 154 | 303 | IPR006016 | - | |
| Car04g01745 | 326 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car04g01745 | Car18g01010 | CCT | |
| Car04g01745 | Car18g01011 | CCT | |
| Car04g01745 | Car18g01010 | ECH | |
| Car04g01745 | Car18g01011 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g01745 | Car-Chr4:10002835 | Car15g00628 | Car-Chr15:3489162 | 2.14E-26 | dispersed | |
| Car13g00875 | Car-Chr13:9255094 | Car04g01745 | Car-Chr4:10002835 | 8.76E-09 | transposed | |
| Car11g00200 | Car-Chr11:1154975 | Car04g01745 | Car-Chr4:10002835 | 1.74E-54 | wgd | |
| Car13g00893 | Car-Chr13:9327725 | Car04g01745 | Car-Chr4:10002835 | 6.34E-55 | wgd | |
| Car18g01011 | Car-Chr18:10548340 | Car04g01745 | Car-Chr4:10002835 | 3.22E-83 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g01745 | - | - | cmos:111458216 | 593.578 |