Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01775 ATGAACCATCTCTTTGAACTTCCTGAAAAGATTTGCTATGTGCAATGTGGAATCTGCACCACCATTTTGCTGGTCAGCGTGCCGTGCAGCAGCTTGTCGATGGAGGTGACCGTGACGTGCGGCCACTGCTCAAGCCTCCTTTCTGTTAACATGCTGAGAGCCACTCTGGTTCCTCTTCATTTTCTGTCTTCTCTATCTCGCAATCTGCCCAAAGAAGCTTGTAGAGAAATGAGTTCAGGGAAGTTGTTTGACAGTTTCATAAGATCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGAAGGCTTGATTCCTGTCACACCCCCCTCTGTAAACAAACCTCCTGAGAAAAGACAGCGTGTCCCATCAGCATACAACTGTTTCATCAAGGATGAAATCAGAAGGCTCAAAGCTGAAAACCCTCAAATGACTCACAAGGAGGCCTTCAGAACAGCTGCAAAAAATTGGGCAAACTTCCCTCCAACAATCCAACAAAAAGAAGACCCACAGAACACTCAAATTCCAGAG 525 44.95 MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPPTIQQKEDPQNTQIPE 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10145112 10146841 - Carg14330-RA Car04g01775 147200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01775 175 MobiDBLite consensus disorder prediction 155 175 - -
Car04g01775 175 Pfam YABBY protein 8 160 IPR006780 GO:0007275
Car04g01775 175 MobiDBLite consensus disorder prediction 156 175 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01775 Car05g00019 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01775 Car-Chr4:10145112 Car15g01044 Car-Chr15:8220769 2.73E-43 dispersed
Car04g01775 Car-Chr4:10145112 Car05g00019 Car-Chr5:110295 1.29E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3398 PF04690 YABBY 4.60E-57 CL0114 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01775 K25796 - csv:101211641 303.523