Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01818 ATGGGTTTTCTTCGTTTTTTGGCTTTGATTCTTCTCGTCGTTTCTTCTGTTCATTGTCAAGTTAAAGAGTTTATCAGTATAGACTGTGGAGCGACGAAGAACTACACCGACCCAGTTACAGGGCTGGTATGGATTTCCGACGCCGGAATCATGAACGCCGGCAGGTCATCGCCGGTGGAAAACCCAAATGGAAACTCGATGCAGTATCAAACACGGCGGGATTTCCCAATCGACAATAAGAAGTACTGTTACAGTTTGAAAACAGAGGAGAGAAGAAGGTATTTGGTTCGAGCAAGTTTTCAGTATGGGAGTTTGAAGAATGAAGAAACGTACCCTAAATTTCAGCTGTATTTGGATGCAACCAAGTGGTCGACTGTTACCATTTTTGATGCTTCGAGAGTGTATGTGAAGGAGATGATCATTAGGGCACCCTCTGATTCCTTCGATGTGTGCATATGCTGTGCTACTACTGGCTCTCCATTCATATCCACTCTTGAGCTGCGCCCTTTTAACCTTTCAATGCAAAATTATCTTGTGGGGGTGGCTCCGGGGACAGAAAGAATAAGAACTTCGAAGAACATTAATGTAATGACAAGGGAATATCCGCCTGTTAAGGTGATGCAAACTGCAGTTCTTGGCACAAAAGGAGTGCTTAGTTACAGGTTGAATTTGGATGATTTTCCTGCCAATGCCAGGGCTTATGCATATTTTGCTGAAATTGAAGATTTGGGTTGGAACGAGACTCGGAAGTTCAAATTAGAGGAACCTAATGTTCCGGACTCGAGCAATGCAGTGGTGAACGTTGAAGAGAATGCCAATGGGACGTATACTCTTTACGAACCCAGTTATATGAACGTGACTCTGAGTTTTGTGCTTTCGTTTTCGTTTGTCAAGACTCGAGATTCAACTCGAGGACCGGTTTTGAATGCATTGGAAATTAGTAGATATGTTGAGATTGCTGCCAAGACTGATAGGCGAGATGAGTCAGTCGTGAATGCCTTCCATAACATGTCAGCAGAGAACGTTCGGACAAACGAAGGCGATCCTTGCGTTCCAACAAGCTGGGAATGGGTGACTTGTACTGCCACGCAACCGCCGAGAATAACTAAAATTAAGCTCTCCGGGAAGAATGTCGAGGGTGGCATTCCACCAGAGATCAATACTATGGATGGATTAATGGAATTGTGGTTGGATGGAAATTCCCTTGCAGGGCCACTGCCTGACTTGAGTAATCTAATAAACTTGAAGATTTTACATCTAGAGAATAACAAATTGACAGGGACGTTACCGTCCTACCTGGGTAGTTTGCCCAACTTACAGGAACTGTACGATGGTAACTTGGGGCTGCATAAAAGTCGACGATTCAATATGCAATCTAAGCTTATTATAGGAGTTTCCCTGGGAGCGAAGTTTGCTGTTACTCCGCAAGCTTCAAAGAACGGCGCCTTACCAGAAAAAAGGTACTATGCTTCTCAACAACTTACCGAAAAGAGCGACGTCTATAGCTTCGGGGTGGTGCTGCTAGAACTGATCTCTGGGAAGAAACCTCAGCATGGAGCTTCCAGGCCAAGGATGCAGGAAGCCATCTTGGCCATACAAGATGCAATCAAGATTGAACATGGTAATGAAGGAAACCAGAAGCAATCTTCAAGCTGTTCAAGAGCACAATCATCTCGAAAAACTTTGCTGACGAGCTTTCTCGAGATCGAGAGCCCCGACGGTTCCATCCTTCCCTCTGCA 1740 44.77 MGFLRFLALILLVVSSVHCQVKEFISIDCGATKNYTDPVTGLVWISDAGIMNAGRSSPVENPNGNSMQYQTRRDFPIDNKKYCYSLKTEERRRYLVRASFQYGSLKNEETYPKFQLYLDATKWSTVTIFDASRVYVKEMIIRAPSDSFDVCICCATTGSPFISTLELRPFNLSMQNYLVGVAPGTERIRTSKNINVMTREYPPVKVMQTAVLGTKGVLSYRLNLDDFPANARAYAYFAEIEDLGWNETRKFKLEEPNVPDSSNAVVNVEENANGTYTLYEPSYMNVTLSFVLSFSFVKTRDSTRGPVLNALEISRYVEIAAKTDRRDESVVNAFHNMSAENVRTNEGDPCVPTSWEWVTCTATQPPRITKIKLSGKNVEGGIPPEINTMDGLMELWLDGNSLAGPLPDLSNLINLKILHLENNKLTGTLPSYLGSLPNLQELYDGNLGLHKSRRFNMQSKLIIGVSLGAKFAVTPQASKNGALPEKRYYASQQLTEKSDVYSFGVVLLELISGKKPQHGASRPRMQEAILAIQDAIKIEHGNEGNQKQSSSCSRAQSSRKTLLTSFLEIESPDGSILPSA 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10544724 10551251 - Carg14287-RA Car04g01818 147243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01818 580 Pfam Malectin-like domain 182 314 IPR024788 -
Car04g01818 580 Pfam Malectin-like domain 27 174 IPR024788 -
Car04g01818 580 Pfam Protein tyrosine and serine/threonine kinase 491 530 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01818 Car18g00670 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01818 Car-Chr4:10544724 Car06g00297 Car-Chr6:1656000 3.96E-07 dispersed
Car18g00671 Car-Chr18:7916792 Car04g01818 Car-Chr4:10544724 1.63E-21 transposed
Car18g00670 Car-Chr18:7911490 Car04g01818 Car-Chr4:10544724 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88823 PF12819 Malectin_like 1.20E-43 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01818 - - csv:101207149 813.913