Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01838 ATGGCGGGAGGAAGATGGCAGCCATCAAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTAATAGACAGCCATAGCCAACCACCTCTCCTCTTCCTCAACAACATTTCTAGTTTTCTCTTCTTCACTCTACTGCTCAACCTCCACTCTAATCGCATTTCGATTCCTCTTTTTCTGGTTACTGCTTCCTTCGCCGCCGGTCGCCGTTGCTGCCTCGTCTCTTTTAGGGCATTTTCCCTCTCGCCGGACGGTCTCTCGCTTCTCTCTCTCAAGTCGGCGGTCGACCAGTCGCCTGATTCCTCTGTTTTCTCCGATTGGAACGAGGATGACTCTACGCCTTGCCGATGGTCTGGCATTTCTTGTATGAATGTTTCTGGCGACTCGCGTGTCGTTGGGATTGCTCTCTCTGGTAAGAATCTCCATGGCTATATTCCTTCTGAGCTTGGGTCGCTTGTCTATCTCCGGCGATTGAACCTCCATAACAATAATTTCTACGGCTCCATACCTGAGCAGTTGTTTAATGCTACCTCATTGCATAGCTTATTTCTCTATAGCAATAATCTATCTGGTTCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAGAACCTCGATCTCTCCAATAATTCTCTCGCCGGACCAATTCCCGACGAATTGAAGAATTGTAAACAGTTGCAGCATTTAATACTCGCCAGAAATCAATTTGACGGAGAAATCCCGTCTGGTATGTGGTCAAGGATGGATAATTTACTTCAACTCGATCTCTCATCCAACGATTTCAGTGGATCGATTCCGGAGGATTTGGGGGAACTGAAGACACTTACCGGTACGCTGAACCTGTCCTTCAATCATTTATCGGGTAAAATTCCGAAGACTCTTGGAGATTTGCCGGTGACGGTGAGTTTCGACCTTCGGAGCAACAATCTGAGCGGAAGCATACCGCAGACGGGTTCCTTTGCGAATCAGGGACCGACTGCATTTCTCAATAATCCCGACTTGTGCGGATTTCCTCTTCAGAAATCTTGTGGGAATTCAGAACGTGGCTCACCGGGTAATCCGGATTCGAAGCCATCTTACATTGCTCCTAGAAAAGGATTGAGCGCCGGACTAATCATTCTCATCTCAGCCGCCGATGCCGCCGGAGTAGCGTTTATCGGCCTGATAATAGTGTACATATATTGGCGAAGGAAGGACGATTCGAACGGCTGTAGCTGTACGGCCAAAAGAAAATTCGGTGGGAACCAGAAAGATCTCTGCGGTTTTCCTTGTATTAATGGACAAGATAAGAATGAGGAGTCTGAAATGGAGGAACCGGAGAACAGTGACAGAAGCAAAGAAGAAGGAGGGCTTGTGGCCATAGACAAAGGCTTTACGTTCGAGCTCGACGAGCTACTGAGAGCATCAGCCTATGTGCTGGGAAAGAGTGGACTAGGGATTGTGTACAAAGTGGTCCTTGGAAATGGGATTCCGGTGGCCGTACGGCGGGTGGGCGAAGGCGGAGAACAGAGGTATAAAGAGTTCGTGGCGGAGGTGCAGGCCATTGGAAGGGTAAAGCATCCCAATATCGTGAAACTGAGAGCTTATTATTGGGCGCCGGATGAGAAGCTTCTGATCAGTGATTTTATCTCCAATGGAAACTTGGCCTCTGCACTTCGCGGGAGAAACGGGCAGCCATCTTCAGAGCTTTCATGGTCAACGAGACTGAGAATTGCCAAGGGAACCGCAAGGGGGTTGGCTTATCTACACGAATGCAGTCCAAGAAAATTCGTCCATGGCGACATCAAGCCCTCCAACATTCTCCTCGACAACGATTTCCAGCCCCACATCTCTGACTTCGGCCTCAACCGTTTGATCAGCATCACCGGCAACAACCCCTCCTCCTCCGGCGGCCTCATCGGCGGCGCCTTCTCTTATCTCAAGTCCGTCCAAACCGAACGCACCAACAACTACTGCGCGCCGGAGGCCCGTGCCCCTGGCGGTCGCCCCACCCAAAAATGGGACGTCTATTCCTTCGGAGTCATGGTCCTCGAATTGCTCACCGGAAAGTCACCGGAGCTTTCTCCCAACACGTCGACTTCTTTGGAGATTCCAGATTTGGTGAGATGGGTCAGAAAAGGATTTGAAGAAGCAAAGCCATTGTCGGATTTGGTCGACCCTGCTCTGCTACAAGAAGTACATGCCAAGAAAGAGGTCCTCGCCGTATTCCACGTGGCGCTCGCTTGTACAGAGAGCGACCCGGAACTCCGGCCCAGAATGAAAACAGTATCAGAGAGTTTCGACAGGATGGGATCGTAA 2298 50.17 MAGGRWQPSKSLSLSLSLSPLIDSHSQPPLLFLNNISSFLFFTLLLNLHSNRISIPLFLVTASFAAGRRCCLVSFRAFSLSPDGLSLLSLKSAVDQSPDSSVFSDWNEDDSTPCRWSGISCMNVSGDSRVVGIALSGKNLHGYIPSELGSLVYLRRLNLHNNNFYGSIPEQLFNATSLHSLFLYSNNLSGSFPPSICNIPRLQNLDLSNNSLAGPIPDELKNCKQLQHLILARNQFDGEIPSGMWSRMDNLLQLDLSSNDFSGSIPEDLGELKTLTGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPDLCGFPLQKSCGNSERGSPGNPDSKPSYIAPRKGLSAGLIILISAADAAGVAFIGLIIVYIYWRRKDDSNGCSCTAKRKFGGNQKDLCGFPCINGQDKNEESEMEEPENSDRSKEEGGLVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRVGEGGEQRYKEFVAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGRNGQPSSELSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPHISDFGLNRLISITGNNPSSSGGLIGGAFSYLKSVQTERTNNYCAPEARAPGGRPTQKWDVYSFGVMVLELLTGKSPELSPNTSTSLEIPDLVRWVRKGFEEAKPLSDLVDPALLQEVHAKKEVLAVFHVALACTESDPELRPRMKTVSESFDRMGS 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10650596 10654544 + Carg14267-RA Car04g01838 147263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01838 765 Pfam Leucine rich repeat N-terminal domain 81 121 IPR013210 -
Car04g01838 765 ProSiteProfiles Protein kinase domain profile. 467 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01838 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Car04g01838 765 Pfam Leucine rich repeat 154 212 IPR001611 GO:0005515
Car04g01838 765 Pfam Protein kinase domain 472 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01838 Car18g00653 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00075 Car-Chr3:957315 Car04g01838 Car-Chr4:10650596 1.81E-144 dispersed
Car04g01544 Car-Chr4:8977076 Car04g01838 Car-Chr4:10650596 0 dispersed
Car04g01838 Car-Chr4:10650596 Car18g00920 Car-Chr18:9971576 0 dispersed
Car17g00700 Car-Chr17:6431475 Car04g01838 Car-Chr4:10650596 5.84E-09 dispersed
Car18g00653 Car-Chr18:7798146 Car04g01838 Car-Chr4:10650596 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88825 PF00069 Pkinase 5.80E-33 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01838 - - csv:101220493 1314.29