Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01863 ATGGAACTTACAGATATGCAGCAAAGCAACAAGCAGCAGCAGCAGCAGCACCATCATCACCATTCAAACCAGAACCAGAAGCCGCCGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCATGTGGTCCCTTTCGATGGCAGATCAGCCGGTGCAGGAGGTGGTCCACCGTTCATGGGCTCCATCTCCACTCTTGTCTCCCTCCCTCCTCCTTCTTCCTCTGGTTCTAATTCTTCTTCTAATTCTTCTTCTTCTTCCTCTTCCTCCGCCGTTGCTCCGACTCCTCACCTCCTCGATGCCTCACTCGTCATCGCTACCAGATCCGATACCACCACTAATCCTTCTCCCCGATCTGCCTCTGCTTCCGCCTCCACCTCCAACGCTAACGCCCTCAAGCGTTCCACTAAAGATCGGCATACTAAGGTCGATGGTCGTGGCCGACGCATCCGTATGCCAGCTACTTGTGCGGCTAGGGTTTTCCAATTGACCCGCGAATTGGGGCATAAGTCCGACGGCGAGACCATCGAGTGGCTTCTCCAGCAAGCTGAGCCTGCGATTATTGCCGCCACTGGTACTGGAACAATCCCTGCTAATTTCTCCTCCTTGAACATTTCCATTCGTAGCAGTGGATCCACTCTCTCTGCTCCTCCCTCAAAATCTGCTCCTCATTCCTTCCATGGCGCTTTGGCTCTCGCTCATCATCCCAATGCCTACGAGGAAGGCTTCGCTCATGCTGCTCTGCTAGGGTTTCACCACCACCACCACCATCAGCAACAGCAGCAGCACCACCACCACCAACTTAATCTAATGACCGCTGATCAAATTGCCGACGCTCTCCCCGGCGGCGAGAGCGGCGGCGGTGGAGGCGGAGGAGGAGGAGGAGACTCGACCGATAACTATATGAGAAAACGCTACAGAGAAGACCTGTTTAAAGAGGACACGCAATCTCCAGGGGAGAGCAGCGGCGGTGCTGGATCTCCCAAAGCGATTAAGAGCGATCTGCAATTAGAGAAACAACAATCCTCGAGCCTACTCCGTCCTGCGACGGCGATGTGGGCCGTGGCTCCAAGCAGTGGAGCGAGCAACACGTTTTGGATGTTGCCAGTAACAACAGGATCAGGCGGAGCAAATGTAGGAAGCTCTGGAGCAAGCGGTGGTCCAATGGAAGCACAAATGTGGCCATTCTCAACGAGTGCAAACACATTGCAGGCTCCATTGCATTTCATGCCAAGATTCAACATCCCTGGAGGCGTCGAAATTCAGGCGGCAGGTGCGGCAGCAGGAGGCGGAGGAAGAGCCGGCCAATTACAACTCGGTTCCATGCTAATGCATCAACAACAACAACAGCAACAGCAACAACAACAGCTTGGGCTGGGAGTATCAGAGTCCAATTTGGGAGTGTTAGCAGCTCTGAATGCTGCGTATTCCAGAGGCGGATTCAATGCTAATTCAGATCATCACCATAATCATCATCCATTGGAGCATCATTCCAACGCACCACAGCCTCACGCAACCGATAGTGGGGACGAAGATCCAAACACTTCCCAGTGA 1569 54.49 MELTDMQQSNKQQQQQHHHHHSNQNQKPPPPPPPPPQQQQQQQQQHHVVPFDGRSAGAGGGPPFMGSISTLVSLPPPSSSGSNSSSNSSSSSSSSAVAPTPHLLDASLVIATRSDTTTNPSPRSASASASTSNANALKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSSLNISIRSSGSTLSAPPSKSAPHSFHGALALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHHQLNLMTADQIADALPGGESGGGGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESSGGAGSPKAIKSDLQLEKQQSSSLLRPATAMWAVAPSSGASNTFWMLPVTTGSGGANVGSSGASGGPMEAQMWPFSTSANTLQAPLHFMPRFNIPGGVEIQAAGAAAGGGGRAGQLQLGSMLMHQQQQQQQQQQQLGLGVSESNLGVLAALNAAYSRGGFNANSDHHHNHHPLEHHSNAPQPHATDSGDEDPNTSQ 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10791537 10793105 + Carg24415-RA Car04g01863 147288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01863 522 MobiDBLite consensus disorder prediction 1 99 - -
Car04g01863 522 ProSiteProfiles TCP domain profile. 141 195 IPR017887 -
Car04g01863 522 MobiDBLite consensus disorder prediction 25 39 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 506 522 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 71 99 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 114 137 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 114 154 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 489 503 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 487 522 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 305 320 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 138 154 - -
Car04g01863 522 MobiDBLite consensus disorder prediction 283 336 - -
Car04g01863 522 Pfam TCP family transcription factor 140 270 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01690 Car-Chr4:9711586 Car04g01863 Car-Chr4:10791537 3.55E-45 dispersed
Car04g01863 Car-Chr4:10791537 Car18g01068 Car-Chr18:10862749 3.66E-47 dispersed
Car18g01119 Car-Chr18:11190657 Car04g01863 Car-Chr4:10791537 2.98E-32 dispersed
Car04g01863 Car-Chr4:10791537 Car10g00176 Car-Chr10:839601 4.32E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3403 PF03634 TCP 3.80E-39 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01863 - - csv:101222378 509.22