Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01894 ATGTCCCTTCCGTCCCCTTCCCTCTTTCTCCTCTTCTTTCCTCTCTTTCTTTCTCCCCTCTCCGCCGCATCTCACCGGACCTTCCTCCCCCTCCTCCGCCACCACCGCCATCTCCTCCACCAACCCTTTTTCCCATGGACTTCATCAATGCCTCCTACTCAACCTCCTTCTCTCTCTCCCTTGCCTCAACCTCAGCACCAACAGCCCAAGCTCCCCTTCTCCTCCACTTCCTACTCCTCGCCCCCCAAACCCTTTTTTCCCTCCTACCCTTCCTCGCCGCCGCCGCCTCCGACACCCCCTTCCACGGCGCTCCCTACGTTTCCGGCTAACATTTCTGCTCTTCTCTTCCCTCAGCCTACTTCTTCTTCCCACCACCTCCACCGCCACGTCTTTGCCATTGTCATCTCTCTCTCTCTTGCTTTCTCTGTTCTTGTTCTTCTCCTTGCTCTGTTCTTCTACTTTCGTAAGCGAAACCCACAAGTCTCTGCTACTGATAAGGCCTCCGGTACTGATAATCTCCGCCTCTACCCGTCGGGTATCGACACTTCCGATGGACTTCACAAGCACAGAACCTCCTCTACTACCACCTCCAAATTTCTCTATCTTGGGACTTTGGCTACTTCTCCAGAGATTGATGAGGAGGCTCCCGGAACTGTGGATGACGGTGCCGGCGGGATTGTGGAGTCGGTTTCTCCGGTGAAAATGGGATCTCCGGAGCTGAACCCCCTTCCGCCTCTTCCTCGCCGGAATTTCGCCCAAGATTATCAGAGGAATGTTGATGGTAATGATAAGGATGATGACGAAGATGGTGAGGACGAAGAGTTCTTTTCGCCGAGAGGATCTTCCGTCGGCGGGAAGGAGAATATGGGGAGAAAAGCTTATAATTCGAGTTTGAATTCTGGTTCACCCTCTGTTTCTGTTCCCAATAGTCCTTCTCCGCCATTGATCTTCAGCCCCACCAGCTTAATCTCGAAATCGCCCGACTCCATTATCAGATTTCCTGTTCCTGTACGGCAGCCGACGCTTCCGGTACCACCATCACCGTCCTTGTCCTCTGCTTCTTCGCCACTCGGAGGTTCCGGAAACACCAAGAACTCGCCATCGAGAGACCCCAATTTGTCGGAGCTACATCGGCAGTTCTCAAATGGATATAGAATGGATCACCAACAACCATTTCCGGTGAAACTGCCACCACCTCCACCTCCACCACCGCCACCGCCGCCTCCAATGTATTGGGAGATTCCTCAATCTTCCAATAAGGAGCCAAATCTAGGTCCACCCGTACTCACAGTGCCATCAAGACCTATACTCTCCCAGAACATAGCTCATATGTCAGCAGAGGAGCAATCAAACGCCATTGGAGATACAGAGCGAATGGAGGAAAATTCGAAGCCGAAACTGAAGGCATTGCATTGGGACAAAGTTCGAACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAATCGAGTTCTTTTCAGTTGAATGAAGAAATGATTGAATCACTTTTTATGGCGAATAACAATAATTTAAATCCAAGCAGCAAAGAAAATGGTGGTGTTCGTCAAAACATGGCTTTAGGGAATCAAGAGAATCGTGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGGAATTCAGATACTTTGGGTACCGAACTGCTCGAAAGCTTACTGAAAATGGCGCCAACAGAAGACGAGGAACGTAAATTAAGAGAATACAAAGACGATTCGCCTTTTAAACTTGGTCCAGCTGAGAAATTCCTCAAGGTAGTTCTTGATGTGCCCTTTGCGTTCAAAAGGGTGGATGCAGTGCTTTACATTGCCAATTTCGATTCTGAGGTCGAGTACCTCGATCGGTCCTTCGAAACGCTCGAGGCTGCTTGTAAAGAATTGAAAGACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACTGGGAACCGAATGAATGTAGGCACGAACCGAGGCGATGCTCATGCCTTTAAACTCGACACCCTTCTCAAGCTTGTCGATATCAAGGGCACGGATGGAAAGACGACTCTCTTGCATTTCGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACATTCCACCTCTGATCACAACGTGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGATGTCGAATTTCGAAAGCTTGGTCTTCAAGTCGTTTCTGGTCTTAGCAGGGAGCTCTCGAGTGTGAAAAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAACGACGTAGAGAAACTCGCTAGAGGGATCACAAAAATCACTGAGGTCATAAGATTGAACGAAGATATGTCGAAAGGAGGGAGCAAGTCGAATTTCTCGGCCTCGATGAACAGGTTCTTGGGGAAGGCAGCTGAAGAAGTAGCAAGGATAGAAGTCCGAGAGCGCATTGTCGTCTCCATGGTCAAGGAAATAACCGAATACTTCCATGGAAACTTAGCGAAAGAAGAAGCTCGACCGCTGCGTATTTTCATGGTGGTAAAGGATTTTCTTGGCATCTTAGATCAGGTATGCAAGGAAGTTGGAAGAATCAACGAAAGAACAATAGTCGGTTCGGCTCGACAATTTACGGGGCCTTCAAATCAAAGTCTTCCATCAATTTTCCCGGGATTGTGCGAAAGTCAACGCTACGGTTCGTCTGATGATGATAGCTCATCTTCCTCGTCTTAG 2763 48.39 MSLPSPSLFLLFFPLFLSPLSAASHRTFLPLLRHHRHLLHQPFFPWTSSMPPTQPPSLSPLPQPQHQQPKLPFSSTSYSSPPKPFFPSYPSSPPPPPTPPSTALPTFPANISALLFPQPTSSSHHLHRHVFAIVISLSLAFSVLVLLLALFFYFRKRNPQVSATDKASGTDNLRLYPSGIDTSDGLHKHRTSSTTTSKFLYLGTLATSPEIDEEAPGTVDDGAGGIVESVSPVKMGSPELNPLPPLPRRNFAQDYQRNVDGNDKDDDEDGEDEEFFSPRGSSVGGKENMGRKAYNSSLNSGSPSVSVPNSPSPPLIFSPTSLISKSPDSIIRFPVPVRQPTLPVPPSPSLSSASSPLGGSGNTKNSPSRDPNLSELHRQFSNGYRMDHQQPFPVKLPPPPPPPPPPPPPMYWEIPQSSNKEPNLGPPVLTVPSRPILSQNIAHMSAEEQSNAIGDTERMEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMANNNNLNPSSKENGGVRQNMALGNQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLGTELLESLLKMAPTEDEERKLREYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAVLYIANFDSEVEYLDRSFETLEAACKELKDSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDHNVTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSSVKKAALMDADVLSNDVEKLARGITKITEVIRLNEDMSKGGSKSNFSASMNRFLGKAAEEVARIEVRERIVVSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLGILDQVCKEVGRINERTIVGSARQFTGPSNQSLPSIFPGLCESQRYGSSDDDSSSSSS 920
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11087285 11090974 + Carg25922-RA Car04g01894 147319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01894 920 MobiDBLite consensus disorder prediction 50 103 - -
Car04g01894 920 MobiDBLite consensus disorder prediction 211 322 - -
Car04g01894 920 MobiDBLite consensus disorder prediction 292 306 - -
Car04g01894 920 MobiDBLite consensus disorder prediction 392 413 - -
Car04g01894 920 MobiDBLite consensus disorder prediction 337 422 - -
Car04g01894 920 MobiDBLite consensus disorder prediction 50 67 - -
Car04g01894 920 MobiDBLite consensus disorder prediction 83 103 - -
Car04g01894 920 Pfam Formin Homology 2 Domain 460 865 IPR015425 -
Car04g01894 920 MobiDBLite consensus disorder prediction 351 386 - -
Car04g01894 920 ProSiteProfiles Formin homology-2 (FH2) domain profile. 457 891 IPR015425 -
Car04g01894 920 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00366 Car-Chr2:2711218 Car04g01894 Car-Chr4:11087285 7.94E-177 dispersed
Car02g01415 Car-Chr2:9295637 Car04g01894 Car-Chr4:11087285 1.68E-06 dispersed
Car04g01894 Car-Chr4:11087285 Car10g00964 Car-Chr10:9110351 1.21E-118 dispersed
Car04g01894 Car-Chr4:11087285 Car19g00146 Car-Chr19:1276446 4.31E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01894 - - cmax:111492166 1435.24