Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g01897 | ATGGATGGAAATGGTGGGATGAAATGGACTGGAATCCGCCATTTTGTGAGGCTGAAACAGACTCTCCAACACTGGCAAGCTGTCACAGTTAACCCGAAATCCCAAGCATCCAATAAAAATCAAAGCCAAAGCCAAAATCATAATCGTGGGATCCTTTCACCAGCAATCAACAAAAGGCTGATGAATGCCATGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAGCATCTATCCGATGTCCCGAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGTAGGTTTATCATTCCCACCAGCTATCTTAGCCATTTGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTATGGATTCGATCACAGTGGCGGGCTAACACTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTACATGGAGATTCAGCAGCTCGATGATCATCCTGATGAGCAGACCCCAGCTGAGAGTTCTTTAAGCATGGAAGGATAA | 507 | 47.53 | MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRLMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDHSGGLTLPCEIETFKYLLKYMEIQQLDDHPDEQTPAESSLSMEG | 168 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 11110863 | 11111721 | + | Carg25919-RA | Car04g01897 | 147322 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g01897 | 168 | Pfam | Auxin responsive protein | 58 | 144 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g01897 | Car-Chr4:11110863 | Car09g00472 | Car-Chr9:2637682 | 2.05E-24 | dispersed | |
| Car04g01897 | Car-Chr4:11110863 | Car01g01208 | Car-Chr1:11133570 | 7.06E-26 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g01897 | K14488 | - | csv:101207913 | 248.825 |