Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01903 ATGGTGTTCCAAGATTTCGACCAAATCTCTGAACGCCGACGACTTGAGAGGGCACGTAAATTCCGCCAGAGAGTCATTATAACCGTGGTGTTAGCCACCGTGATCATCCTCCTCGTAGCCGCCGCCGTCTTCATCCAGGTCTCCCCTGCTCCCTCCTCCTCCTCCAAAACCTCCAACAAAGATGGAAAATCCAAGAAACATCCCAAGTCCAACGCCGACACCAAAACCGACACCGACTCCAAGGATGCGTCCAGTGCTGAGAAAATGATTGTGATGATATGCAATTCCACTGACTTCAAGGAGAAATGCGAGAGCATTTTGAAGGACGGCTTGAAGGCGAACCCCAAATCCTCTGACCCCAAAGAGCTGATTAAGCTGGCCATCACCGCCGCCGCGGCTGAGGTCAAATCCGCTTTGAAAAAGGCCAGTAACTTGAAATTCGCGACGCCGGAGGAGAAGGGTGCGTTCGAGGACTGTAAGGTTTTGATGGAAGACGCGGTGGAGGAATTAGAGATGTCTATGACGGCGGTGAGTAAGAAGAATCAGGGGAAGCTGACGGAGAAGACGACGCCGGATTTGAATAACTGGCTGAGTGCGGTGATGTCGTATCATGAGACTTGTGTTGATGGGTTCCCTGATGGGTCTAAGATGAAGCAGGAAATGGAGAAGATTGGGAAGAGTGGGAAGGAATTGACCAGTAATTCCTTGGCCATGATATCGCAGGTGGCTACGTTCTTCTCTAAGTTTGAGTCTGAGGGGCCTGGGGAGGGTGCTGCAACGCGACGGCGTTTAATGGACCAGGATGAACTTCCAAGCTGGATGGATAGCAATGAGCGGAGGATGTTGAAGGGCGCTACGGCGGGGGATAAGCCTACGCCTAACGTTGTGGTTGCCCAAGATGGGTCTGGCAATTTTAAAACTATTAATGAAGCCTTGGCTGCCATGCCTGCCAAGTATGATGGACGGTACGTGATCTATCTAAAGGAAGGAATCTACGAGGAGGCGGTGGTGATCACCAAAAAGATGGTAAATGTGACAATGTACGGAGATGGGTCACAAAAGAGCATGATAAGTGGAAACAAGAACTTCAAGGATGGAGTTAGAACATTCCAAACCGCATCTTTCGTGGCACTTGGAGACGGGTTCTTCGCGCAAGCCATAGGATTCAGAAACACAGCAGGTCCAGAGAAGCACCAAGCCGTAGCAGCAAGAGTCCAAGCAGACCGAGCCATATTCCTAAACTGCCGCTTCGACGGGTACCAGGACACGCTCTACGCACAAGCCCACCGACATTTCTACAGAAGCTGCCTAATAACAGGCACCATCGACTTCATCTTCGGAGACGCCGCCGCCATTTTCCAAAACTGCAACATGATGGTGAAAAAGCCGTTAGACAAGCAACAGAACATAGTGACAGCACAGGGCAGAAGCGACAGGCACGAAACCACAGCCATAGTGCTGCAAAGGTGCAAGATTTTACCCGACAAGACACTGGAGGCAGTGAAGTCGCAGTTCAAAAGCTACTTGGGGAGGCCGTGGAAGGAGTACTCCAGAACCATTGTAATGGAGTCCACGATTGAGGACATAATTCACCCGGAGGGGTGGTTGGCTTGGGAAGGGGATTTTGCGCTGAAGACGTTGTACTATGCGGAGTTTAACAACGATGGGCCTGGGGCTAAGACCGAGGGCAGGGTGAAGTGGCCTGGGCATAAGGTGATTGACAAGGAGGAGGCTGCCAAGTTTACGATAGGAAGTTTTCTAGAGGTGGATTGGATCCAGAGCACGTCGGCTCCAGTTCACGTCGGCCTATTTTGA 1815 51.24 MVFQDFDQISERRRLERARKFRQRVIITVVLATVIILLVAAAVFIQVSPAPSSSSKTSNKDGKSKKHPKSNADTKTDTDSKDASSAEKMIVMICNSTDFKEKCESILKDGLKANPKSSDPKELIKLAITAAAAEVKSALKKASNLKFATPEEKGAFEDCKVLMEDAVEELEMSMTAVSKKNQGKLTEKTTPDLNNWLSAVMSYHETCVDGFPDGSKMKQEMEKIGKSGKELTSNSLAMISQVATFFSKFESEGPGEGAATRRRLMDQDELPSWMDSNERRMLKGATAGDKPTPNVVVAQDGSGNFKTINEALAAMPAKYDGRYVIYLKEGIYEEAVVITKKMVNVTMYGDGSQKSMISGNKNFKDGVRTFQTASFVALGDGFFAQAIGFRNTAGPEKHQAVAARVQADRAIFLNCRFDGYQDTLYAQAHRHFYRSCLITGTIDFIFGDAAAIFQNCNMMVKKPLDKQQNIVTAQGRSDRHETTAIVLQRCKILPDKTLEAVKSQFKSYLGRPWKEYSRTIVMESTIEDIIHPEGWLAWEGDFALKTLYYAEFNNDGPGAKTEGRVKWPGHKVIDKEEAAKFTIGSFLEVDWIQSTSAPVHVGLF 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11212776 11215448 - Carg25913-RA Car04g01903 147328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01903 604 Pfam Plant invertase/pectin methylesterase inhibitor 90 238 IPR006501 GO:0004857
Car04g01903 604 MobiDBLite consensus disorder prediction 50 81 - -
Car04g01903 604 ProSitePatterns Pectinesterase signature 2. 438 447 IPR033131 -
Car04g01903 604 MobiDBLite consensus disorder prediction 59 81 - -
Car04g01903 604 Pfam Pectinesterase 294 588 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01903 Car-Chr4:11212776 Car15g00960 Car-Chr15:7028201 3.43E-131 dispersed
Car04g02106 Car-Chr4:17173079 Car04g01903 Car-Chr4:11212776 1.27E-98 dispersed
Car15g00807 Car-Chr15:4568998 Car04g01903 Car-Chr4:11212776 7.56E-58 dispersed
Car04g01903 Car-Chr4:11212776 Car07g00252 Car-Chr7:1371909 4.08E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01903 - - cmax:111492523 1102.81