Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01906 ATGGTTGGTTCATTTGGCTATAGTGCTCCGGAATTTGCCTTGTCGGGTTTGTACACGGTCAAAAGTGACGTTTATAGCTTTGGGGTCGTGATGTTGGAGCTCTTGAGTGGCCGAAAGCCGCTTGACAGTTCGAGGGCGAGATCGGAGCAATCACTTGTGAGATGGGCTACTCCCCAACTTCACGATATCGACGCCTTGGCAAAAATGGTAGACCCTACTTTGAACGGAATGTACCCTGCGAAATCTCTATCGCGCTTCGCCGACATTATTGCTCTTTGTGTCCAGCCCGAGCCTGAATTCCGACCTCCAATGTCTGAAGTAGTACAAGCACTGGTACGGTTAGTGCAAAGAGCCAGTGTGGTAAAAAGGCATTCGAGTGACGAGTCGGGTTTCACGTACAAAACACCCGAGCACGATGTAGTTGATTTGCCATTTTGA 438 49.32 MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESGFTYKTPEHDVVDLPF 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11252302 11253329 + Carg25910-RA Car04g01906 147331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01906 145 Pfam Protein tyrosine and serine/threonine kinase 7 111 IPR001245 GO:0004672|GO:0006468
Car04g01906 145 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01906 Car-Chr4:11252302 Car17g00608 Car-Chr17:5738112 1.04E-65 dispersed
Car04g01906 Car-Chr4:11252302 Car01g00018 Car-Chr1:92178 1.12E-65 transposed
Car04g01906 Car-Chr4:11252302 Car08g00721 Car-Chr8:4628073 2.07E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88828 PF07714 PK_Tyr_Ser-Thr 1.60E-12 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01906 - - csv:101216091 280.796