Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01931 ATGGAGCAAGAAGATCGGATTGAAGAAGGTAGCTCCAGGTTGCTGCGGAGGAGTAGCGTTACTGGCAGTAGTAACGATTACAGGTGGGTTGATGGCAGTGAAGTGGACTCCGAGTCGCCTCCATGGTCGCTGTTTGAAGAAAGAGAAAGCGGAGATGGATATGGATCTATGAGAAGGAGATTGGTTAAGAAGCCCAAGAGAGTCGATTCTTTTGACGTTGAAGCTATGGAGATTGCCGGTGCCAACTATCACCATTTAAAGGATGTTTCCATTTGGCAAACTATTGCTATAGCATTTCAAACACTTGGTGTTGTATATGGTGATATGGGTACAAGTCCATTATACGTCTTTGCTGATGTATTCAGCAAGGTGCATATTGAGGCAGATGTTGACGTCCTGGGGGCTCTATCCTTAGTGATTTACACAATTGCTCTTATTCCGTTGGCAAAATACGTGTTTGTAGTGCTCAAAGCCAACGACAATGGGGAAGGAGGAACATTTGCATTGTATTCACTGATTTGTAGGTACGCCAAAGTTAACATGCTGCCAAACCGTCAGCCAGCTGATGAACATATCTCAAGTTTTAAGCTCAAACTACCAACTCCAGAGTTGGAAAGGGCCTTAAATATCAAAGAAACTCTCGAGAAGAGATCATCCTTGAAAACTCTTATATTGCTGCTGGTTCTGATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAGATAAAGTCATTCGATACAAATGCTGTGGTCGTTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGGACGGGGAAAGTAGGATTTATGTTTGCTCCTGTGCTTGCTTTGTGGTTTTTTAGCCTGGGATCTATTGGAATTTACAATTTAGTGAAGTATGATCTCACCGTTATAAGGGCTCTCAATCCCGCTTACATCTATTTATTCTTCAAGAAAAATTCTAATAACGCATGGTCAGCTCTTGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTTGCTGATCTAGGCCATTTCACCGTGCCAGCCATACAGATTGCCTTCACATGTGTTGTTTTCCCCTGCCTTCTCCTGGCGTACATGGGTCAGGCTGCATATCTCATGAAACATCCAGAATCTGCAGCAAGAATATTTTATGATTCTGTGCCAGGTGATAATTGTCAATGTGGAAGCATTCATTTACTTCAGTCCATTTATTTGGCTTACTTCCCTGCTTTGGTGTCCTTGGTTTCTGAACAAACAGCAAGTCTTTTTTGGCCAGTCTTTGTGACAGCAGCACTTGCTGCTATGATTGCGAGCCAAGCAATGATATCTGCGACCTTTTCTTGTGTCAAACAATCTATGGCTCTTGGTTGTTTTCCGAGAATGAAGATAGTTCACACGTCTAAGAGACGAATGGGTCAAATTTACATCCCTATGATCAATTGGTTCTTGATGATAATGTGCATACTTGTTGTTGCAATATTTCGAAGGACTACAGACATCGCCAATGCCTATGGTATTGCTGAAGTTGGTGTGATGCTGGTGAGTACTGCCCTGGTGACCCTAGTAATGCTTCTGATCTGGCAGACAAATTTGTTTCTTGCGTTATGTTTCCCACTTGTATTTGGATCAGTGGAACTTATCTACTTATCTGCAGTTTTATCAAAAATCAGAGAAGGTGGGTGGTTGCCACTTGCTTTTGCGTCCGTTTTCCTCTCTGTGATGTACATATGGAACTATGGGAGTGTGTTGAAGTATCAAAGTGAGGTGAGGGAGAAGATATCAACGGATTTCTTGTTTGAACTGGGATCTACCCTTGGAACTGTAAGAGTTCCAGGAATTGGTCTCCTCTACAACGAGCTTGTCCAAGGCATTCCAGCAATTTTTGGGCAATTTCTTCTCACCCTTCCAGCCATCCACTCCACAATTGTGTTCGTGTGTATTAAATATGTTCCAATACCCGTGGTTCCGCAAGAGGAAAGATTTTTGTTCAGAAGGGTTGGTCCAAAAGACTACCATATATTTCGTTGCATCGCGAGATATGGCTACAAAGATGTGCGGAAGGAAGATCACCATGCATTTGAGCAGCTTCTGATGGAAAGCCTCGAGAAGTTCTTAAGAAAGGAGTCTGATGACCTTGCCCTGGAGAGCAATTTGAATGAGTTGGAATTTGATAATATTTCAGAGAGGTTGAGGGATTCTTCTCCAACCCCAGGTGGCATTGATGTGAATGAGGAGCTGAGAATTCCATTGATGGAAGAGGCAAGAAGGACAAGCTCGGAAGAATCTCTTGGGGCGCGGTTGCCATCCAGCATCATGGCATCGGGTGACGACCCTAGTTTGGAGTATGAGCTATCAGCCCTTAGGGAAGCCATGGATTCAGGATTTACATATCTACTGGCACAAGGGGATGTCCGAGCAAAGAAAAACTCATTTTTTATTAAGAAGCTTGTTATAAATTATTTTTATGCGTTCCTAAGGAGGAACTGCAGGGGCGGTGCAGCAACAATGCGAGTTCCTCACATGAACATCATGCAAGTTGGGATGACTTACATGGTTTGA 2613 43.28 MEQEDRIEEGSSRLLRRSSVTGSSNDYRWVDGSEVDSESPPWSLFEERESGDGYGSMRRRLVKKPKRVDSFDVEAMEIAGANYHHLKDVSIWQTIAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLKANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSFKLKLPTPELERALNIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVVVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNLVKYDLTVIRALNPAYIYLFFKKNSNNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLMKHPESAARIFYDSVPGDNCQCGSIHLLQSIYLAYFPALVSLVSEQTASLFWPVFVTAALAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPMINWFLMIMCILVVAIFRRTTDIANAYGIAEVGVMLVSTALVTLVMLLIWQTNLFLALCFPLVFGSVELIYLSAVLSKIREGGWLPLAFASVFLSVMYIWNYGSVLKYQSEVREKISTDFLFELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLTLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHIFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESDDLALESNLNELEFDNISERLRDSSPTPGGIDVNEELRIPLMEEARRTSSEESLGARLPSSIMASGDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFIKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11870959 11876895 + Carg27986-RA Car04g01931 147356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01931 870 MobiDBLite consensus disorder prediction 14 30 - -
Car04g01931 870 MobiDBLite consensus disorder prediction 1 49 - -
Car04g01931 870 Pfam K+ potassium transporter 98 702 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01931 Car-Chr4:11870959 Car14g01219 Car-Chr14:10591000 0 dispersed
Car17g01050 Car-Chr17:8207461 Car04g01931 Car-Chr4:11870959 0 dispersed
Car04g01931 Car-Chr4:11870959 Car04g00368 Car-Chr4:2084626 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01931 K03549 - csv:101202804 1460.66