Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01945 ATGGGCTGCATTTGCTCTAAGGGAATTCCAGCAAACGATTATTTTACTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCATCCAGACTTCTTGGGGCTTCATTGAGAAAAGAAGAACCTGCATTGCACGTTGATGTAGGGCGAAGTGATGCAATGGCGCTATTGATATCTAACCAACCTGGGGAAGGTAATGCTGGATCAACACCTGAATTGGATGACGCTGAGAAGGCAGCAGCCAGTGCCAAGCCACTGCGTCAAGAACAGCCAACTATGGAGGATGGAGCAAAGAGAGTAGGAGTACATAATGATAATGCAACACCTAGAATAGTTAATGTTGTTAATGTGGAAGAGGGGGCTTTGGTTATTGCTGAATGGCCTTCTTGGTTGATATCTGTGGCTGGAGAAGCAATCAATGGATTGATTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCACGATACTGAAACAAACAAGATTGTTGCATTGAAGAAGGTGCGATTTTCTAACATGGATCCTGAAAGCGTTCGTTTCATGGCGAGGGAAATTCTTATCCTGCGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATTACTTCAAGGGTATCGGGCAGTTTATACCTCATATTTGAGTACATGGAACATGATCTTGCAGGGTTGGCAGCAACCCCAGGGATCAAGTTCACTGAAGCACAGATCAAATGCTATATGCAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCCCGAGGTGTTTTGCACCGTGACATCAAGGGCTCAAATCTTCTGATTGACAATAATGGTAACCTTAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCATTCCCGTCAAAAGCAGGCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTACTTGGTGCAAAGGACTATGAAGTTTCTGTTGATTTGTGGAGTTCAGGTTGCATTCTTGCAGAATTATATGCTGGGAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACATAAGATCTTCAAACTCTGTGGCTCTCCGTCTGAAGAATACTGGAAAAAATCAAAATTACCTCATGCCACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTCCCTTCCTCTGCATTGGCCCTTTTGGATGTGCTTCTTGCGGTGGAACCTGATGGCCGTGGAACAGCTTCCTCTGCCCTTCAAAGTCAGTTCTTTACCACCAAACCGCTTCCCTCGGATCCCTCTACTGTGCCAAAGTACCCACCAAGCAAGGAGTTCGACGCGAAGTGCCGAGACGAGGAATCTCAAAGAAGAAGAGCTCCTATCAGTGTAGCACGTGAACATGAGGCAGCTCAAAAGTGTCCCAGAGAATCAAAAGCGATTCCTGCACCAGATGCAAATGCTGAATTGCAGGCATCCATACAGAAACAAAGGCAGCATAATCCCACAAGTTTCAGTGAAAAGTATATTCCTGAAGAGAATGGTGGCTCTGGCATTCGCATCGAACCCCCAAAAGAAGCAACGCAAATGGCGTCGACTGCATTGGGTTCTTCACAAAACATGAACGGGAATCAGCGTGATAATCTAATAAGAGGTTCCTCAGTTGGAGCCAAAGGTGCAGAACTTAGAAAACAAAGATCTTATGTGCAGCATGGTGGTGTAAAGTTGTCCAGGTATTCCAATTCCATTGCAGTTCGAGGTGGTTCACGATTCGGCTGTGGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGCGTTGAATCTTCAGAAAAGCATGAATGGTCTCACCATTTACTAGACACACCAAAATCTTCATACAAGATAGATTATCAGTCATCTGGAAAAGAGTCTACTAAGAGTTATGCTCCAAAGAAGAGAATTCACTACTCAGGACCCCTGATGCCTGCTGGTGGAAACCTTGAGGAAATGTTAAAGGAGCACGAGAAACAAATGCAGCATGGGGTGCGCAAGGCTCGTATCGACAAAGCTAAGATAAACAAGACGTGCAGCGACAAAGGTCAAACGGAGTCGTTGCTTCACCATGCGAGAAATGGCAGTTGA 2160 44.95 MGCICSKGIPANDYFTENHSKERHLKSNRSSRLLGASLRKEEPALHVDVGRSDAMALLISNQPGEGNAGSTPELDDAEKAAASAKPLRQEQPTMEDGAKRVGVHNDNATPRIVNVVNVEEGALVIAEWPSWLISVAGEAINGLIPRKADSFQKLDKIGQGTYSSVYRAHDTETNKIVALKKVRFSNMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLAATPGIKFTEAQIKCYMQQLLCGLEHCHARGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFHSRQKQALTSRVVTLWYRPPELLLGAKDYEVSVDLWSSGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPSSALALLDVLLAVEPDGRGTASSALQSQFFTTKPLPSDPSTVPKYPPSKEFDAKCRDEESQRRRAPISVAREHEAAQKCPRESKAIPAPDANAELQASIQKQRQHNPTSFSEKYIPEENGGSGIRIEPPKEATQMASTALGSSQNMNGNQRDNLIRGSSVGAKGAELRKQRSYVQHGGVKLSRYSNSIAVRGGSRFGCGPEECFNVSYNHFNGVESSEKHEWSHHLLDTPKSSYKIDYQSSGKESTKSYAPKKRIHYSGPLMPAGGNLEEMLKEHEKQMQHGVRKARIDKAKINKTCSDKGQTESLLHHARNGS 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12574842 12584882 - Carg24964-RA Car04g01945 147370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01945 719 ProSiteProfiles Protein kinase domain profile. 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01945 719 Pfam Protein kinase domain 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01945 719 MobiDBLite consensus disorder prediction 435 532 - -
Car04g01945 719 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Car04g01945 719 MobiDBLite consensus disorder prediction 61 103 - -
Car04g01945 719 MobiDBLite consensus disorder prediction 454 485 - -
Car04g01945 719 MobiDBLite consensus disorder prediction 699 719 - -
Car04g01945 719 MobiDBLite consensus disorder prediction 500 520 - -
Car04g01945 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01945 Car-Chr4:12574842 Car06g00743 Car-Chr6:5090310 0 dispersed
Car04g01945 Car-Chr4:12574842 Car04g00518 Car-Chr4:2917917 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88831 PF00069 Pkinase 1.60E-68 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01945 - - csv:101214435 1197.57